Protein–RNA interactions for Protein: Q99325

ATG40, Autophagy-related protein 40, yeastyeast

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
ATG40Q99325 PIN3YPR154W 648 nt2.26□□□□□ -2.05
ATG40Q99325 CIN1YOR349W 3045 nt2.26□□□□□ -2.05
ATG40Q99325 CDC55YGL190C 1581 nt2.26□□□□□ -2.05
ATG40Q99325 ADY4YLR227C 1482 nt2.26□□□□□ -2.05
ATG40Q99325 YPL150WYPL150W 2706 nt2.26□□□□□ -2.05
ATG40Q99325 SKT5YBL061C 2091 nt2.26□□□□□ -2.05
ATG40Q99325 VAS1YGR094W 3315 nt2.25□□□□□ -2.05
ATG40Q99325 SPT2YER161C 1002 nt2.25□□□□□ -2.05
ATG40Q99325 BLS1YLR408C 369 nt2.25□□□□□ -2.05
ATG40Q99325 NMA111YNL123W 2994 nt2.25□□□□□ -2.05
ATG40Q99325 AAH1YNL141W 1044 nt2.25□□□□□ -2.05
ATG40Q99325 RPS12YOR369C 432 nt2.25□□□□□ -2.05
ATG40Q99325 MUM2YBR057C 1101 nt2.25□□□□□ -2.05
ATG40Q99325 YSA1YBR111C 696 nt2.25□□□□□ -2.05
ATG40Q99325 SPP382YLR424W 2127 nt2.24□□□□□ -2.05
ATG40Q99325 THO1YER063W 657 nt2.24□□□□□ -2.05
ATG40Q99325 YIL156W-AYIL156W-A 402 nt2.24□□□□□ -2.05
ATG40Q99325 SYS1YJL004C 612 nt2.24□□□□□ -2.05
ATG40Q99325 SWD2YKL018W 990 nt2.24□□□□□ -2.05
ATG40Q99325 GLO1YML004C 981 nt2.24□□□□□ -2.05
ATG40Q99325 YBL081WYBL081W 1107 nt2.24□□□□□ -2.05
ATG40Q99325 MSN1YOL116W 1149 nt2.24□□□□□ -2.05
ATG40Q99325 YBR085C-AYBR085C-A 258 nt2.24□□□□□ -2.05
ATG40Q99325 HRD1YOL013C 1656 nt2.24□□□□□ -2.05
ATG40Q99325 NFT1YKR103W 3657 nt2.24□□□□□ -2.05
ATG40Q99325 YDL199CYDL199C 2064 nt2.24□□□□□ -2.05
ATG40Q99325 SEC26YDR238C 2922 nt2.24□□□□□ -2.05
ATG40Q99325 NAB3YPL190C 2409 nt2.23□□□□□ -2.05
ATG40Q99325 YLR001CYLR001C 2589 nt2.23□□□□□ -2.05
ATG40Q99325 IRA2YOL081W 9240 nt2.23□□□□□ -2.05
ATG40Q99325 HUL5YGL141W 2733 nt2.23□□□□□ -2.05
ATG40Q99325 tC(GCA)BtC(GCA)B 72 nt2.23□□□□□ -2.05
ATG40Q99325 tC(GCA)GtC(GCA)G 72 nt2.23□□□□□ -2.05
ATG40Q99325 tC(GCA)P1tC(GCA)P1 72 nt2.23□□□□□ -2.05
ATG40Q99325 tC(GCA)P2tC(GCA)P2 72 nt2.23□□□□□ -2.05
ATG40Q99325 ADH4YGL256W 1149 nt2.23□□□□□ -2.05
ATG40Q99325 DCG1YIR030C 735 nt2.23□□□□□ -2.05
ATG40Q99325 YLR290CYLR290C 834 nt2.23□□□□□ -2.05
ATG40Q99325 RSM19YNR037C 276 nt2.23□□□□□ -2.05
ATG40Q99325 ATG29YPL166W 642 nt2.23□□□□□ -2.05
ATG40Q99325 YPR078CYPR078C 1119 nt2.23□□□□□ -2.05
ATG40Q99325 VPS13YLL040C 9435 nt2.23□□□□□ -2.05
ATG40Q99325 FKS3YMR306W 5358 nt2.23□□□□□ -2.05
ATG40Q99325 GIN4YDR507C 3429 nt2.23□□□□□ -2.05
ATG40Q99325 MED2YDL005C 1296 nt2.22□□□□□ -2.05
ATG40Q99325 RRP42YDL111C 798 nt2.22□□□□□ -2.05
ATG40Q99325 AIM11YER093C-A 414 nt2.22□□□□□ -2.05
ATG40Q99325 YIP5YGL161C 933 nt2.22□□□□□ -2.05
ATG40Q99325 TAN1YGL232W 870 nt2.22□□□□□ -2.05
ATG40Q99325 PTI1YGR156W 1278 nt2.22□□□□□ -2.05
ATG40Q99325 EPT1YHR123W 1176 nt2.22□□□□□ -2.05
ATG40Q99325 MBB1YJL199C 327 nt2.22□□□□□ -2.05
ATG40Q99325 RNH203YLR154C 333 nt2.22□□□□□ -2.05
ATG40Q99325 COS1YNL336W 1146 nt2.22□□□□□ -2.05
ATG40Q99325 YOL019W-AYOL019W-A 153 nt2.22□□□□□ -2.05
ATG40Q99325 AFT2YPL202C 1251 nt2.22□□□□□ -2.05
ATG40Q99325 MRP2YPR166C 348 nt2.22□□□□□ -2.05
ATG40Q99325 SIN3YOL004W 4611 nt2.22□□□□□ -2.05
ATG40Q99325 SWC4YGR002C 1431 nt2.22□□□□□ -2.05
ATG40Q99325 PIN4YBL051C 2007 nt2.22□□□□□ -2.05
ATG40Q99325 BNR1YIL159W 4128 nt2.21□□□□□ -2.06
ATG40Q99325 FRE8YLR047C 2061 nt2.21□□□□□ -2.06
ATG40Q99325 YGR017WYGR017W 894 nt2.21□□□□□ -2.06
ATG40Q99325 SNX4YJL036W 1272 nt2.21□□□□□ -2.06
ATG40Q99325 YJR056CYJR056C 711 nt2.21□□□□□ -2.06
ATG40Q99325 YKL066WYKL066W 444 nt2.21□□□□□ -2.06
ATG40Q99325 VAC14YLR386W 2643 nt2.21□□□□□ -2.06
ATG40Q99325 RPL23AYBL087C 414 nt2.21□□□□□ -2.06
ATG40Q99325 CET1YPL228W 1650 nt2.21□□□□□ -2.06
ATG40Q99325 NUF2YOL069W 1356 nt2.21□□□□□ -2.06
ATG40Q99325 SAD1YFR005C 1347 nt2.2□□□□□ -2.06
ATG40Q99325 RDS2YPL133C 1341 nt2.2□□□□□ -2.06
ATG40Q99325 LRS4YDR439W 1044 nt2.2□□□□□ -2.06
ATG40Q99325 YGR039WYGR039W 312 nt2.2□□□□□ -2.06
ATG40Q99325 DOG1YHR044C 741 nt2.2□□□□□ -2.06
ATG40Q99325 GPI14YJR013W 1212 nt2.2□□□□□ -2.06
ATG40Q99325 YKL156C-AYKL156C-A 117 nt2.2□□□□□ -2.06
ATG40Q99325 YKR011CYKR011C 1062 nt2.2□□□□□ -2.06
ATG40Q99325 MIC27YNL100W 705 nt2.2□□□□□ -2.06
ATG40Q99325 PFY1YOR122C 381 nt2.2□□□□□ -2.06
ATG40Q99325 YOR331CYOR331C 558 nt2.2□□□□□ -2.06
ATG40Q99325 MRPL27YBR282W 441 nt2.2□□□□□ -2.06
ATG40Q99325 VPS64YDR200C 1815 nt2.19□□□□□ -2.06
ATG40Q99325 MRD1YPR112C 2664 nt2.19□□□□□ -2.06
ATG40Q99325 PHO81YGR233C 3537 nt2.19□□□□□ -2.06
ATG40Q99325 NHP10YDL002C 612 nt2.19□□□□□ -2.06
ATG40Q99325 DDI2YFL061W 678 nt2.19□□□□□ -2.06
ATG40Q99325 RPL24BYGR148C 468 nt2.19□□□□□ -2.06
ATG40Q99325 GLG2YJL137C 1143 nt2.19□□□□□ -2.06
ATG40Q99325 YLL037WYLL037W 381 nt2.19□□□□□ -2.06
ATG40Q99325 YLR311CYLR311C 348 nt2.19□□□□□ -2.06
ATG40Q99325 YBL096CYBL096C 309 nt2.19□□□□□ -2.06
ATG40Q99325 MSH2YOL090W 2895 nt2.19□□□□□ -2.06
ATG40Q99325 MYO5YMR109W 3660 nt2.19□□□□□ -2.06
ATG40Q99325 UBP8YMR223W 1416 nt2.18□□□□□ -2.06
ATG40Q99325 YDL050CYDL050C 372 nt2.18□□□□□ -2.06
ATG40Q99325 HTA1YDR225W 399 nt2.18□□□□□ -2.06
ATG40Q99325 YGR114CYGR114C 390 nt2.18□□□□□ -2.06
ATG40Q99325 YHR097CYHR097C 1101 nt2.18□□□□□ -2.06
ATG40Q99325 YAL031W-AYAL031W-A 309 nt2.18□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 17.6 ms