Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 AC131212.1-201ENST00000613771 668 ntBASIC17.68■□□□□ 0.42
CLCC1Q96S66 AC009086.3-201ENST00000623486 1008 ntBASIC17.68■□□□□ 0.42
CLCC1Q96S66 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CLCC1Q96S66 AC080038.3-201ENST00000623346 1952 ntBASIC17.68■□□□□ 0.42
CLCC1Q96S66 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.68■□□□□ 0.42
CLCC1Q96S66 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 SRD5A1P1-201ENST00000442297 786 ntBASIC17.67■□□□□ 0.42
CLCC1Q96S66 AC099791.2-201ENST00000605725 427 ntBASIC17.67■□□□□ 0.42
CLCC1Q96S66 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 AC004687.1-201ENST00000579003 1625 ntBASIC17.67■□□□□ 0.42
CLCC1Q96S66 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCC1Q96S66 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCC1Q96S66 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 QDPR-206ENST00000508623 601 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCC1Q96S66 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCC1Q96S66 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCC1Q96S66 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCC1Q96S66 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCC1Q96S66 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 AC006455.2-201ENST00000429931 906 ntBASIC17.65■□□□□ 0.42
CLCC1Q96S66 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCC1Q96S66 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLCC1Q96S66 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCC1Q96S66 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC17.64■□□□□ 0.42
CLCC1Q96S66 AC087742.1-201ENST00000575880 1738 ntBASIC17.64■□□□□ 0.41
CLCC1Q96S66 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCC1Q96S66 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCC1Q96S66 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCC1Q96S66 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLCC1Q96S66 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCC1Q96S66 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCC1Q96S66 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCC1Q96S66 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLCC1Q96S66 AC241377.3-202ENST00000626088 1088 ntBASIC17.64■□□□□ 0.41
CLCC1Q96S66 AC241585.3-202ENST00000628937 1088 ntBASIC17.64■□□□□ 0.41
CLCC1Q96S66 AC245100.8-202ENST00000629247 1058 ntBASIC17.64■□□□□ 0.41
CLCC1Q96S66 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.64■□□□□ 0.41
CLCC1Q96S66 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLCC1Q96S66 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.63■□□□□ 0.41
CLCC1Q96S66 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLCC1Q96S66 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms