Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 AC087742.1-201ENST00000575880 1738 ntBASIC18.71■□□□□ 0.59
PCNX1Q96RV3 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PCNX1Q96RV3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.58
PCNX1Q96RV3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.71■□□□□ 0.58
PCNX1Q96RV3 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.71■□□□□ 0.58
PCNX1Q96RV3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC18.71■□□□□ 0.58
PCNX1Q96RV3 AC092118.2-201ENST00000613495 667 ntBASIC18.71■□□□□ 0.58
PCNX1Q96RV3 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 AC008550.1-201ENST00000511500 884 ntBASIC18.7■□□□□ 0.58
PCNX1Q96RV3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 AC008175.2-201ENST00000612840 297 ntBASIC18.7■□□□□ 0.58
PCNX1Q96RV3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.7■□□□□ 0.58
PCNX1Q96RV3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 C9orf163-202ENST00000624034 2573 ntBASIC18.69■□□□□ 0.58
PCNX1Q96RV3 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 MIPEPP3-201ENST00000412105 444 ntBASIC18.69■□□□□ 0.58
PCNX1Q96RV3 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.69■□□□□ 0.58
PCNX1Q96RV3 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 AL355472.2-201ENST00000422958 438 ntBASIC18.68■□□□□ 0.58
PCNX1Q96RV3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 AC010980.2-201ENST00000587099 1412 ntBASIC18.68■□□□□ 0.58
PCNX1Q96RV3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 AC093787.1-201ENST00000450396 207 ntBASIC18.68■□□□□ 0.58
PCNX1Q96RV3 AC097658.1-201ENST00000475555 843 ntBASIC18.68■□□□□ 0.58
PCNX1Q96RV3 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PCNX1Q96RV3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 AC026366.1-201ENST00000488803 879 ntBASIC18.67■□□□□ 0.58
PCNX1Q96RV3 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 AP003097.1-201ENST00000530657 1135 ntBASIC18.67■□□□□ 0.58
PCNX1Q96RV3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PCNX1Q96RV3 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 AC120498.10-201ENST00000621827 505 ntBASIC18.66■□□□□ 0.58
PCNX1Q96RV3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.66■□□□□ 0.58
PCNX1Q96RV3 AC128676.1-201ENST00000454392 318 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms