Protein–RNA interactions for Protein: Q96PB1

CASD1, N-acetylneuraminate 9-O-acetyltransferase, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASD1Q96PB1 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.73■■□□□ 1.23
CASD1Q96PB1 AC083880.1-201ENST00000608266 535 ntBASIC22.73■■□□□ 1.23
CASD1Q96PB1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.73■■□□□ 1.23
CASD1Q96PB1 MYC-209ENST00000641252 345 ntBASIC22.73■■□□□ 1.23
CASD1Q96PB1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
CASD1Q96PB1 AC010980.2-201ENST00000587099 1412 ntBASIC22.73■■□□□ 1.23
CASD1Q96PB1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
CASD1Q96PB1 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CASD1Q96PB1 RARRES2P4-201ENST00000514074 484 ntBASIC22.72■■□□□ 1.23
CASD1Q96PB1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 AC008687.6-201ENST00000596318 630 ntBASIC22.72■■□□□ 1.23
CASD1Q96PB1 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CASD1Q96PB1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
CASD1Q96PB1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.72■■□□□ 1.23
CASD1Q96PB1 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 AC092053.2-201ENST00000640557 1818 ntBASIC22.71■■□□□ 1.23
CASD1Q96PB1 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CASD1Q96PB1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 ITM2C-210ENST00000620962 501 ntBASIC22.71■■□□□ 1.23
CASD1Q96PB1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.71■■□□□ 1.23
CASD1Q96PB1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC22.7■■□□□ 1.22
CASD1Q96PB1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC22.7■■□□□ 1.22
CASD1Q96PB1 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC22.7■■□□□ 1.22
CASD1Q96PB1 RHEB-204ENST00000472642 900 ntTSL 3 BASIC22.7■■□□□ 1.22
CASD1Q96PB1 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CASD1Q96PB1 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CASD1Q96PB1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CASD1Q96PB1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CASD1Q96PB1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CASD1Q96PB1 AC097658.1-201ENST00000475555 843 ntBASIC22.69■■□□□ 1.22
CASD1Q96PB1 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CASD1Q96PB1 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CASD1Q96PB1 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC22.69■■□□□ 1.22
CASD1Q96PB1 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 AC091874.3-201ENST00000512672 1195 ntBASIC22.68■■□□□ 1.22
CASD1Q96PB1 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
CASD1Q96PB1 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CASD1Q96PB1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.67■■□□□ 1.22
CASD1Q96PB1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CASD1Q96PB1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 KRT18P29-201ENST00000397031 1267 ntBASIC22.66■■□□□ 1.22
CASD1Q96PB1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC22.66■■□□□ 1.22
CASD1Q96PB1 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CASD1Q96PB1 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms