Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SLC46A1Q96NT5 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 AC069236.1-201ENST00000604339 616 ntBASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SLC46A1Q96NT5 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AC127496.7-201ENST00000625110 1798 ntBASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AL034346.1-201ENST00000568244 1277 ntBASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SLC46A1Q96NT5 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 AC093787.1-201ENST00000450396 207 ntBASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SLC46A1Q96NT5 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 OR7E47P-201ENST00000546390 1422 ntBASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 AC016405.3-201ENST00000607710 860 ntBASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 AP006294.2-201ENST00000641667 209 ntBASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SLC46A1Q96NT5 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 BX276092.2-201ENST00000417668 665 ntBASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 RPS2P52-201ENST00000469610 820 ntBASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SLC46A1Q96NT5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms