Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.94■□□□□ 0.94
CFAP54Q96N23 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP54Q96N23 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.94■□□□□ 0.94
CFAP54Q96N23 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.94■□□□□ 0.94
CFAP54Q96N23 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CFAP54Q96N23 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CFAP54Q96N23 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 EEF1DP3-203ENST00000566025 782 ntBASIC20.93■□□□□ 0.94
CFAP54Q96N23 AC069544.1-201ENST00000609399 999 ntBASIC20.93■□□□□ 0.94
CFAP54Q96N23 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 AL162412.1-201ENST00000567129 965 ntBASIC20.93■□□□□ 0.94
CFAP54Q96N23 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC20.93■□□□□ 0.94
CFAP54Q96N23 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CFAP54Q96N23 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.92■□□□□ 0.94
CFAP54Q96N23 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CFAP54Q96N23 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 AC138907.5-202ENST00000569484 235 ntBASIC20.91■□□□□ 0.94
CFAP54Q96N23 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CFAP54Q96N23 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.91■□□□□ 0.94
CFAP54Q96N23 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC20.9■□□□□ 0.94
CFAP54Q96N23 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
CFAP54Q96N23 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 AC010141.3-201ENST00000456659 717 ntBASIC20.9■□□□□ 0.94
CFAP54Q96N23 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 USF2-205ENST00000594064 1179 ntTSL 2 BASIC20.9■□□□□ 0.94
CFAP54Q96N23 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CFAP54Q96N23 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.89■□□□□ 0.94
CFAP54Q96N23 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP54Q96N23 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP54Q96N23 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CFAP54Q96N23 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.89■□□□□ 0.94
CFAP54Q96N23 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CFAP54Q96N23 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.89■□□□□ 0.93
CFAP54Q96N23 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.89■□□□□ 0.93
CFAP54Q96N23 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.89■□□□□ 0.93
CFAP54Q96N23 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.89■□□□□ 0.93
CFAP54Q96N23 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
CFAP54Q96N23 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CFAP54Q96N23 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP54Q96N23 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CFAP54Q96N23 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms