Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CALR3Q96L12 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
CALR3Q96L12 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
CALR3Q96L12 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC22.33■■□□□ 1.16
CALR3Q96L12 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
CALR3Q96L12 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC22.32■■□□□ 1.16
CALR3Q96L12 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.32■■□□□ 1.16
CALR3Q96L12 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
CALR3Q96L12 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
CALR3Q96L12 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.32■■□□□ 1.16
CALR3Q96L12 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.32■■□□□ 1.16
CALR3Q96L12 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC22.31■■□□□ 1.16
CALR3Q96L12 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
CALR3Q96L12 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 BX842568.3-201ENST00000418104 571 ntBASIC22.31■■□□□ 1.16
CALR3Q96L12 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 AC133561.4-201ENST00000566112 224 ntBASIC22.31■■□□□ 1.16
CALR3Q96L12 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22.31■■□□□ 1.16
CALR3Q96L12 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CALR3Q96L12 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.3■■□□□ 1.16
CALR3Q96L12 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.3■■□□□ 1.16
CALR3Q96L12 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CALR3Q96L12 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CALR3Q96L12 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.3■■□□□ 1.16
CALR3Q96L12 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
CALR3Q96L12 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.3■■□□□ 1.16
CALR3Q96L12 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CALR3Q96L12 SMUG1P1-201ENST00000590640 811 ntBASIC22.3■■□□□ 1.16
CALR3Q96L12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC22.3■■□□□ 1.16
CALR3Q96L12 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.3■■□□□ 1.16
CALR3Q96L12 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CALR3Q96L12 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.29■■□□□ 1.16
CALR3Q96L12 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.29■■□□□ 1.16
CALR3Q96L12 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
CALR3Q96L12 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.29■■□□□ 1.16
CALR3Q96L12 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.29■■□□□ 1.16
CALR3Q96L12 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.29■■□□□ 1.16
CALR3Q96L12 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CALR3Q96L12 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC22.29■■□□□ 1.16
CALR3Q96L12 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
CALR3Q96L12 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CALR3Q96L12 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.28■■□□□ 1.16
CALR3Q96L12 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 AC009237.3-201ENST00000393279 1427 ntBASIC22.28■■□□□ 1.16
CALR3Q96L12 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CALR3Q96L12 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CALR3Q96L12 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.27■■□□□ 1.16
CALR3Q96L12 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
CALR3Q96L12 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CALR3Q96L12 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CALR3Q96L12 STX5-203ENST00000394690 1568 ntTSL 5 BASIC22.27■■□□□ 1.16
CALR3Q96L12 PTMA-205ENST00000410064 814 ntTSL 2 BASIC22.27■■□□□ 1.16
CALR3Q96L12 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.16
CALR3Q96L12 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.27■■□□□ 1.16
CALR3Q96L12 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.27■■□□□ 1.16
CALR3Q96L12 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CALR3Q96L12 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CALR3Q96L12 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms