Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
TTC9Q92623 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.12■□□□□ 0.81
TTC9Q92623 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TTC9Q92623 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
TTC9Q92623 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.11■□□□□ 0.81
TTC9Q92623 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
TTC9Q92623 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
TTC9Q92623 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.11■□□□□ 0.81
TTC9Q92623 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
TTC9Q92623 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TTC9Q92623 LINC01960-201ENST00000563759 1884 ntBASIC20.11■□□□□ 0.81
TTC9Q92623 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.11■□□□□ 0.81
TTC9Q92623 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.11■□□□□ 0.81
TTC9Q92623 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
TTC9Q92623 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.1■□□□□ 0.81
TTC9Q92623 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC9Q92623 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC9Q92623 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.09■□□□□ 0.81
TTC9Q92623 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.09■□□□□ 0.81
TTC9Q92623 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.09■□□□□ 0.81
TTC9Q92623 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
TTC9Q92623 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.09■□□□□ 0.81
TTC9Q92623 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TTC9Q92623 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
TTC9Q92623 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9Q92623 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
TTC9Q92623 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TTC9Q92623 AC005224.4-201ENST00000583262 1652 ntBASIC20.08■□□□□ 0.81
TTC9Q92623 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.08■□□□□ 0.81
TTC9Q92623 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.08■□□□□ 0.81
TTC9Q92623 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TTC9Q92623 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC9Q92623 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
TTC9Q92623 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
TTC9Q92623 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.08■□□□□ 0.8
TTC9Q92623 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC9Q92623 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
TTC9Q92623 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC9Q92623 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
TTC9Q92623 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.07■□□□□ 0.8
TTC9Q92623 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
TTC9Q92623 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.07■□□□□ 0.8
TTC9Q92623 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
TTC9Q92623 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
TTC9Q92623 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 AP001160.3-201ENST00000601484 763 ntBASIC20.07■□□□□ 0.8
TTC9Q92623 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TTC9Q92623 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC9Q92623 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TTC9Q92623 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.06■□□□□ 0.8
TTC9Q92623 MIPEPP3-201ENST00000412105 444 ntBASIC20.06■□□□□ 0.8
TTC9Q92623 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC9Q92623 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.06■□□□□ 0.8
TTC9Q92623 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.06■□□□□ 0.8
TTC9Q92623 RARRES2P4-201ENST00000514074 484 ntBASIC20.06■□□□□ 0.8
TTC9Q92623 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
TTC9Q92623 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.06■□□□□ 0.8
TTC9Q92623 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 OXCT2P1-201ENST00000447263 1535 ntBASIC20.06■□□□□ 0.8
TTC9Q92623 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC9Q92623 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TTC9Q92623 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC9Q92623 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms