Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
PTCD2Q8WV60 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.39■■□□□ 1.02
PTCD2Q8WV60 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
PTCD2Q8WV60 AC009237.3-201ENST00000393279 1427 ntBASIC21.39■■□□□ 1.02
PTCD2Q8WV60 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 BX005040.4-201ENST00000637145 1518 ntBASIC21.39■■□□□ 1.01
PTCD2Q8WV60 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
PTCD2Q8WV60 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.38■■□□□ 1.01
PTCD2Q8WV60 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
PTCD2Q8WV60 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 IKBKGP1-201ENST00000612193 1073 ntBASIC21.36■■□□□ 1.01
PTCD2Q8WV60 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 PXK-203ENST00000383715 1756 ntTSL 5 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.36■■□□□ 1.01
PTCD2Q8WV60 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 AL137060.1-201ENST00000618151 2648 ntBASIC21.35■■□□□ 1.01
PTCD2Q8WV60 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
PTCD2Q8WV60 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
PTCD2Q8WV60 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCD2Q8WV60 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
PTCD2Q8WV60 FEM1AP4-201ENST00000443167 1987 ntBASIC21.34■■□□□ 1.01
PTCD2Q8WV60 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
PTCD2Q8WV60 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms