Protein–RNA interactions for Protein: Q8TD31

CCHCR1, Coiled-coil alpha-helical rod protein 1, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1Q8TD31 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCHCR1Q8TD31 RASA4CP-201ENST00000424092 1398 ntBASIC21.97■■□□□ 1.11
CCHCR1Q8TD31 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.97■■□□□ 1.11
CCHCR1Q8TD31 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CCHCR1Q8TD31 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCHCR1Q8TD31 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 MPST-208ENST00000628507 698 ntTSL 5 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.95■■□□□ 1.1
CCHCR1Q8TD31 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 AP005435.1-201ENST00000529293 1178 ntBASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 AF106564.1-201ENST00000607058 2553 ntBASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.94■■□□□ 1.1
CCHCR1Q8TD31 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC21.93■■□□□ 1.1
CCHCR1Q8TD31 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
CCHCR1Q8TD31 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
CCHCR1Q8TD31 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 HYI-206ENST00000372434 1025 ntTSL 5 BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC21.9■■□□□ 1.1
CCHCR1Q8TD31 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms