Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC31.47■■■□□ 2.63
CCER1Q8TC90 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.47■■■□□ 2.63
CCER1Q8TC90 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC31.47■■■□□ 2.63
CCER1Q8TC90 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC31.47■■■□□ 2.63
CCER1Q8TC90 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC31.47■■■□□ 2.63
CCER1Q8TC90 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.46■■■□□ 2.63
CCER1Q8TC90 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC31.46■■■□□ 2.63
CCER1Q8TC90 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC31.46■■■□□ 2.63
CCER1Q8TC90 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCER1Q8TC90 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCER1Q8TC90 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
CCER1Q8TC90 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
CCER1Q8TC90 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCER1Q8TC90 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
CCER1Q8TC90 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
CCER1Q8TC90 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.45■■■□□ 2.63
CCER1Q8TC90 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
CCER1Q8TC90 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCER1Q8TC90 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCER1Q8TC90 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
CCER1Q8TC90 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCER1Q8TC90 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
CCER1Q8TC90 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC31.44■■■□□ 2.62
CCER1Q8TC90 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC31.44■■■□□ 2.62
CCER1Q8TC90 PARN-205ENST00000539279 1557 ntTSL 2 BASIC31.43■■■□□ 2.62
CCER1Q8TC90 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCER1Q8TC90 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCER1Q8TC90 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCER1Q8TC90 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC31.43■■■□□ 2.62
CCER1Q8TC90 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
CCER1Q8TC90 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC31.43■■■□□ 2.62
CCER1Q8TC90 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC31.43■■■□□ 2.62
CCER1Q8TC90 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC31.42■■■□□ 2.62
CCER1Q8TC90 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC31.42■■■□□ 2.62
CCER1Q8TC90 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC31.42■■■□□ 2.62
CCER1Q8TC90 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
CCER1Q8TC90 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC31.42■■■□□ 2.62
CCER1Q8TC90 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CCER1Q8TC90 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
CCER1Q8TC90 SMUG1P1-201ENST00000590640 811 ntBASIC31.41■■■□□ 2.62
CCER1Q8TC90 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC31.41■■■□□ 2.62
CCER1Q8TC90 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CCER1Q8TC90 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
CCER1Q8TC90 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCER1Q8TC90 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC31.4■■■□□ 2.62
CCER1Q8TC90 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCER1Q8TC90 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCER1Q8TC90 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC31.4■■■□□ 2.62
CCER1Q8TC90 LINC01006-201ENST00000333319 2292 ntBASIC31.4■■■□□ 2.62
CCER1Q8TC90 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CCER1Q8TC90 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CCER1Q8TC90 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCER1Q8TC90 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCER1Q8TC90 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC31.39■■■□□ 2.62
CCER1Q8TC90 AL136116.3-201ENST00000402907 1138 ntBASIC31.39■■■□□ 2.62
CCER1Q8TC90 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC31.39■■■□□ 2.62
CCER1Q8TC90 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
CCER1Q8TC90 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
CCER1Q8TC90 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms