Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 AC061975.6-201ENST00000579045 1553 ntBASIC16.54■□□□□ 0.24
LINC01006Q8NI28 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
LINC01006Q8NI28 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 PRORSD1P-201ENST00000295112 541 ntBASIC16.53■□□□□ 0.24
LINC01006Q8NI28 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 AC091874.3-201ENST00000512672 1195 ntBASIC16.53■□□□□ 0.24
LINC01006Q8NI28 BET1L-207ENST00000529614 560 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
LINC01006Q8NI28 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 COMT-203ENST00000403184 2217 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
LINC01006Q8NI28 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LINC01006Q8NI28 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC16.52■□□□□ 0.23
LINC01006Q8NI28 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
LINC01006Q8NI28 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
LINC01006Q8NI28 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
LINC01006Q8NI28 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 AC003102.1-202ENST00000563394 1796 ntBASIC16.51■□□□□ 0.23
LINC01006Q8NI28 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC16.51■□□□□ 0.23
LINC01006Q8NI28 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.51■□□□□ 0.23
LINC01006Q8NI28 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 ESRRAP1-201ENST00000400596 1257 ntBASIC16.5■□□□□ 0.23
LINC01006Q8NI28 DUSP5P2-201ENST00000426873 1033 ntBASIC16.5■□□□□ 0.23
LINC01006Q8NI28 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
LINC01006Q8NI28 LTK-203ENST00000453182 2412 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
LINC01006Q8NI28 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms