Protein–RNA interactions for Protein: Q8NEB9

PIK3C3, Phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3Q8NEB9 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 OR7E47P-201ENST00000546390 1422 ntBASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 LINC01006-201ENST00000333319 2292 ntBASIC19.76■□□□□ 0.75
PIK3C3Q8NEB9 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PIK3C3Q8NEB9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 AC068587.7-201ENST00000641602 218 ntBASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 AC026471.6-201ENST00000622954 1905 ntBASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PIK3C3Q8NEB9 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PIK3C3Q8NEB9 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 MIR4466-201ENST00000606121 54 ntBASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.72■□□□□ 0.75
PIK3C3Q8NEB9 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 AC099791.2-201ENST00000605725 427 ntBASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PIK3C3Q8NEB9 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 OR2I1P-207ENST00000453522 948 ntBASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 AC008406.3-201ENST00000620001 1374 ntBASIC19.7■□□□□ 0.74
PIK3C3Q8NEB9 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 AL136116.3-201ENST00000402907 1138 ntBASIC19.69■□□□□ 0.74
PIK3C3Q8NEB9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms