Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
SMRP1Q8NCR6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
SMRP1Q8NCR6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.08■■□□□ 1.12
SMRP1Q8NCR6 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 C1QBPP2-201ENST00000528754 825 ntBASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
SMRP1Q8NCR6 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 AC211429.1-201ENST00000415277 523 ntBASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 CYP2T3P-201ENST00000601990 817 ntBASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 AC092068.2-201ENST00000590491 1708 ntBASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC22.06■■□□□ 1.12
SMRP1Q8NCR6 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 Z99916.2-201ENST00000604037 246 ntBASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 AC020928.2-201ENST00000588717 2197 ntBASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC22.05■■□□□ 1.12
SMRP1Q8NCR6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 ANOS2P-203ENST00000472227 1816 ntBASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 SNORA78-201ENST00000459373 127 ntBASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC22.04■■□□□ 1.12
SMRP1Q8NCR6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AL355472.2-201ENST00000422958 438 ntBASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AC010331.1-201ENST00000611423 582 ntBASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 REXO1L12P-201ENST00000622156 912 ntBASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
SMRP1Q8NCR6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 RN7SL471P-201ENST00000580476 299 ntBASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
SMRP1Q8NCR6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SMRP1Q8NCR6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
SMRP1Q8NCR6 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.11
SMRP1Q8NCR6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms