Protein–RNA interactions for Protein: Q8NCN4

RNF169, E3 ubiquitin-protein ligase RNF169, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF169Q8NCN4 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.02■■□□□ 1.27
RNF169Q8NCN4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
RNF169Q8NCN4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23■■□□□ 1.27
RNF169Q8NCN4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC23■■□□□ 1.27
RNF169Q8NCN4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 CYP2T1P-201ENST00000432607 1285 ntBASIC23■■□□□ 1.27
RNF169Q8NCN4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23■■□□□ 1.27
RNF169Q8NCN4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 SLC7A5P1-201ENST00000568957 537 ntBASIC23■■□□□ 1.27
RNF169Q8NCN4 AC133552.2-202ENST00000575694 574 ntBASIC23■■□□□ 1.27
RNF169Q8NCN4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF169Q8NCN4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC23■■□□□ 1.27
RNF169Q8NCN4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
RNF169Q8NCN4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23■■□□□ 1.27
RNF169Q8NCN4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
RNF169Q8NCN4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 AC098934.4-201ENST00000564127 592 ntBASIC22.99■■□□□ 1.27
RNF169Q8NCN4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 C1orf229-201ENST00000623686 2258 ntBASIC22.99■■□□□ 1.27
RNF169Q8NCN4 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
RNF169Q8NCN4 AC068338.2-201ENST00000563278 1430 ntBASIC22.99■■□□□ 1.27
RNF169Q8NCN4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
RNF169Q8NCN4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 TSPY20P-201ENST00000450910 630 ntBASIC22.97■■□□□ 1.27
RNF169Q8NCN4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 PHB2-213ENST00000546111 858 ntTSL 2 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 KRT18P6-201ENST00000555540 1265 ntBASIC22.97■■□□□ 1.27
RNF169Q8NCN4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
RNF169Q8NCN4 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
RNF169Q8NCN4 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
RNF169Q8NCN4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.95■■□□□ 1.26
RNF169Q8NCN4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC22.95■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms