Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LINC00528Q8N1L1 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC13.86□□□□□ -0.19
LINC00528Q8N1L1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00528Q8N1L1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00528Q8N1L1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LINC00528Q8N1L1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 FP325331.1-202ENST00000623531 1380 ntBASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 AC016769.1-201ENST00000409132 1010 ntBASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 DUX4L4-201ENST00000566884 1269 ntBASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 AC026310.3-201ENST00000625186 2373 ntBASIC13.85□□□□□ -0.19
LINC00528Q8N1L1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC13.84□□□□□ -0.19
LINC00528Q8N1L1 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 HLA-L-209ENST00000420110 1011 ntBASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LINC00528Q8N1L1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 LINC01529-204ENST00000636474 1715 ntBASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 DENND3-207ENST00000518347 850 ntTSL 2 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 AC137761.2-201ENST00000561729 223 ntBASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 AC145350.3-201ENST00000569033 163 ntBASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
LINC00528Q8N1L1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
LINC00528Q8N1L1 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms