Protein–RNA interactions for Protein: Q8N139

ABCA6, ATP-binding cassette sub-family A member 6, humanhuman

Predictions only

Length 1,617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA6Q8N139 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ABCA6Q8N139 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC31.78■■■□□ 2.68
ABCA6Q8N139 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC31.77■■■□□ 2.68
ABCA6Q8N139 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCA6Q8N139 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCA6Q8N139 ECEL1P3-201ENST00000427961 737 ntBASIC31.77■■■□□ 2.68
ABCA6Q8N139 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
ABCA6Q8N139 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
ABCA6Q8N139 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC31.77■■■□□ 2.68
ABCA6Q8N139 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ABCA6Q8N139 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC31.76■■■□□ 2.68
ABCA6Q8N139 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.76■■■□□ 2.68
ABCA6Q8N139 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC31.76■■■□□ 2.68
ABCA6Q8N139 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC31.76■■■□□ 2.68
ABCA6Q8N139 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.68
ABCA6Q8N139 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC31.76■■■□□ 2.67
ABCA6Q8N139 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
ABCA6Q8N139 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC31.76■■■□□ 2.67
ABCA6Q8N139 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC31.76■■■□□ 2.67
ABCA6Q8N139 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC31.76■■■□□ 2.67
ABCA6Q8N139 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
ABCA6Q8N139 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC31.75■■■□□ 2.67
ABCA6Q8N139 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC31.75■■■□□ 2.67
ABCA6Q8N139 AC069544.1-201ENST00000609399 999 ntBASIC31.75■■■□□ 2.67
ABCA6Q8N139 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ABCA6Q8N139 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC31.74■■■□□ 2.67
ABCA6Q8N139 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC31.74■■■□□ 2.67
ABCA6Q8N139 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ABCA6Q8N139 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC31.74■■■□□ 2.67
ABCA6Q8N139 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
ABCA6Q8N139 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC31.73■■■□□ 2.67
ABCA6Q8N139 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
ABCA6Q8N139 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC31.73■■■□□ 2.67
ABCA6Q8N139 NME6-213ENST00000451657 871 ntTSL 2 BASIC31.73■■■□□ 2.67
ABCA6Q8N139 RPPH1-201ENST00000516869 333 ntBASIC31.73■■■□□ 2.67
ABCA6Q8N139 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC31.73■■■□□ 2.67
ABCA6Q8N139 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ABCA6Q8N139 FAM197Y4-202ENST00000622692 608 ntBASIC31.73■■■□□ 2.67
ABCA6Q8N139 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.73■■■□□ 2.67
ABCA6Q8N139 AC061975.6-201ENST00000579045 1553 ntBASIC31.73■■■□□ 2.67
ABCA6Q8N139 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC31.72■■■□□ 2.67
ABCA6Q8N139 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 GXYLT1P3-201ENST00000453058 1193 ntBASIC31.72■■■□□ 2.67
ABCA6Q8N139 C1QBPP2-201ENST00000528754 825 ntBASIC31.72■■■□□ 2.67
ABCA6Q8N139 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC31.72■■■□□ 2.67
ABCA6Q8N139 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
ABCA6Q8N139 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 PNMA6B-201ENST00000538162 1200 ntBASIC31.71■■■□□ 2.67
ABCA6Q8N139 KLF2-202ENST00000592003 564 ntTSL 3 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 MIR718-201ENST00000390190 70 ntBASIC31.71■■■□□ 2.67
ABCA6Q8N139 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
ABCA6Q8N139 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.71■■■□□ 2.67
ABCA6Q8N139 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC31.7■■■□□ 2.67
ABCA6Q8N139 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ABCA6Q8N139 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC31.7■■■□□ 2.67
ABCA6Q8N139 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
ABCA6Q8N139 MDFI-202ENST00000373050 809 ntTSL 2 BASIC31.7■■■□□ 2.66
ABCA6Q8N139 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC31.7■■■□□ 2.66
ABCA6Q8N139 LSM12P1-201ENST00000411836 588 ntBASIC31.7■■■□□ 2.66
ABCA6Q8N139 SNORA78-201ENST00000459373 127 ntBASIC31.7■■■□□ 2.66
ABCA6Q8N139 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
ABCA6Q8N139 CYP2T3P-201ENST00000601990 817 ntBASIC31.7■■■□□ 2.66
ABCA6Q8N139 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC31.7■■■□□ 2.66
ABCA6Q8N139 HLA-B-256ENST00000639848 1089 ntBASIC31.7■■■□□ 2.66
ABCA6Q8N139 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
ABCA6Q8N139 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms