Protein–RNA interactions for Protein: Q8N0S2

SYCE1, Synaptonemal complex central element protein 1, humanhuman

Predictions only

Length 351 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1Q8N0S2 SLC47A1P1-202ENST00000449666 945 ntBASIC22.31■■□□□ 1.16
SYCE1Q8N0S2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SYCE1Q8N0S2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SYCE1Q8N0S2 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
SYCE1Q8N0S2 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SYCE1Q8N0S2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.27■■□□□ 1.16
SYCE1Q8N0S2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 FEM1AP1-201ENST00000431297 1995 ntBASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SYCE1Q8N0S2 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
SYCE1Q8N0S2 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms