Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 AP003097.1-201ENST00000530657 1135 ntBASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.16■□□□□ 0.82
COL27A1Q8IZC6 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 AL355472.2-201ENST00000422958 438 ntBASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 AC006058.3-201ENST00000606217 1069 ntBASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 AC120498.10-201ENST00000621827 505 ntBASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 AC008694.1-202ENST00000636953 945 ntBASIC20.15■□□□□ 0.82
COL27A1Q8IZC6 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
COL27A1Q8IZC6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
COL27A1Q8IZC6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 AC091799.1-201ENST00000422823 811 ntBASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.14■□□□□ 0.81
COL27A1Q8IZC6 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
COL27A1Q8IZC6 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 ESRRAP1-201ENST00000400596 1257 ntBASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL27A1Q8IZC6 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AC003102.1-202ENST00000563394 1796 ntBASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AL591742.1-201ENST00000604433 565 ntBASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AC026366.1-201ENST00000488803 879 ntBASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
COL27A1Q8IZC6 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL27A1Q8IZC6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms