Protein–RNA interactions for Protein: Q8IYB3

SRRM1, Serine/arginine repetitive matrix protein 1, humanhuman

Known RBP Predictions only

Length 904 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1Q8IYB3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SRRM1Q8IYB3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SRRM1Q8IYB3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.36■■□□□ 1.01
SRRM1Q8IYB3 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 KRT125P-201ENST00000546827 989 ntBASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.35■■□□□ 1.01
SRRM1Q8IYB3 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 AC133637.1-201ENST00000624115 1537 ntBASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SRRM1Q8IYB3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 KRT16P3-201ENST00000439127 1283 ntBASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.33■■□□□ 1.01
SRRM1Q8IYB3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRRM1Q8IYB3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
SRRM1Q8IYB3 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.33■■□□□ 1
SRRM1Q8IYB3 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.33■■□□□ 1
SRRM1Q8IYB3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 MIR4787-201ENST00000607364 84 ntBASIC21.32■■□□□ 1
SRRM1Q8IYB3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.32■■□□□ 1
SRRM1Q8IYB3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
SRRM1Q8IYB3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
SRRM1Q8IYB3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
SRRM1Q8IYB3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms