Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CROCCP3Q8IVE0 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.13■□□□□ 0.65
CROCCP3Q8IVE0 PCDHAC2-203ENST00000615316 3011 ntBASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 LONRF2P2-201ENST00000439212 571 ntBASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 TNXA-203ENST00000507684 2038 ntBASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CROCCP3Q8IVE0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
CROCCP3Q8IVE0 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 OXCT2P1-201ENST00000447263 1535 ntBASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CROCCP3Q8IVE0 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
CROCCP3Q8IVE0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms