Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.72■□□□□ 0.59
LRRC28Q86X40 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
LRRC28Q86X40 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
LRRC28Q86X40 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 SUDS3P1-201ENST00000505831 966 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 DUX4L4-201ENST00000566884 1269 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 MIR4767-201ENST00000582827 78 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 AL031432.3-201ENST00000607698 485 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 pRNA.6-201ENST00000610482 90 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 pRNA.5-201ENST00000612139 90 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 pRNA.11-201ENST00000618423 90 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 pRNA.13-201ENST00000619112 90 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 FEM1AP1-201ENST00000431297 1995 ntBASIC18.71■□□□□ 0.59
LRRC28Q86X40 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.71■□□□□ 0.59
LRRC28Q86X40 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
LRRC28Q86X40 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.71■□□□□ 0.58
LRRC28Q86X40 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 AC142381.2-201ENST00000566120 298 ntBASIC18.7■□□□□ 0.58
LRRC28Q86X40 AC136469.2-201ENST00000623944 1028 ntBASIC18.7■□□□□ 0.58
LRRC28Q86X40 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.7■□□□□ 0.58
LRRC28Q86X40 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 RNF165-205ENST00000588679 2904 ntBASIC18.7■□□□□ 0.58
LRRC28Q86X40 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
LRRC28Q86X40 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC28Q86X40 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC28Q86X40 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC28Q86X40 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC28Q86X40 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
LRRC28Q86X40 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 GRAMD4P4-201ENST00000613563 1115 ntBASIC18.69■□□□□ 0.58
LRRC28Q86X40 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.69■□□□□ 0.58
LRRC28Q86X40 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
LRRC28Q86X40 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC28Q86X40 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.68■□□□□ 0.58
LRRC28Q86X40 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC28Q86X40 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
LRRC28Q86X40 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC28Q86X40 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms