Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 AL136116.3-201ENST00000402907 1138 ntBASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 SLC47A1P1-202ENST00000449666 945 ntBASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MRPL55Q7Z7F7 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 USP48-205ENST00000421625 2818 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
MRPL55Q7Z7F7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 AP004607.7-201ENST00000527152 1677 ntBASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MRPL55Q7Z7F7 AC026471.6-201ENST00000622954 1905 ntBASIC13.52□□□□□ -0.24
MRPL55Q7Z7F7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC13.52□□□□□ -0.24
MRPL55Q7Z7F7 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC13.52□□□□□ -0.24
MRPL55Q7Z7F7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MRPL55Q7Z7F7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC13.51□□□□□ -0.25
MRPL55Q7Z7F7 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms