Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.15■□□□□ 0.5
RAI1Q7Z5J4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.14■□□□□ 0.5
RAI1Q7Z5J4 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
RAI1Q7Z5J4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 TERF1P5-201ENST00000477545 1207 ntBASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 ITM2C-210ENST00000620962 501 ntBASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 OR10C1-204ENST00000622521 1039 ntBASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.14■□□□□ 0.49
RAI1Q7Z5J4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 POU5F1P3-201ENST00000428824 1078 ntBASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 RNA5SP413-201ENST00000516373 109 ntBASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 MYC-209ENST00000641252 345 ntBASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.13■□□□□ 0.49
RAI1Q7Z5J4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 AC093827.2-201ENST00000512654 315 ntBASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.12■□□□□ 0.49
RAI1Q7Z5J4 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 KRT16P2-201ENST00000414673 1423 ntBASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 AC137767.1-201ENST00000602918 1920 ntBASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 AL512625.2-201ENST00000417533 625 ntBASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RAI1Q7Z5J4 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 AL162412.1-201ENST00000567129 965 ntBASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 AC008687.6-201ENST00000596318 630 ntBASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.1■□□□□ 0.49
RAI1Q7Z5J4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.09■□□□□ 0.49
RAI1Q7Z5J4 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RAI1Q7Z5J4 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RAI1Q7Z5J4 RBM17P2-201ENST00000616397 1405 ntBASIC18.09■□□□□ 0.49
RAI1Q7Z5J4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms