Protein–RNA interactions for Protein: Q6ZP82

CCDC141, Coiled-coil domain-containing protein 141, humanhuman

Predictions only

Length 1,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC141Q6ZP82 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 AC097658.1-201ENST00000475555 843 ntBASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
CCDC141Q6ZP82 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 AC003102.1-202ENST00000563394 1796 ntBASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 GCSHP5-201ENST00000443090 522 ntBASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
CCDC141Q6ZP82 NFE2L3P1-201ENST00000588207 1959 ntBASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC31.87■■■□□ 2.69
CCDC141Q6ZP82 COMT-203ENST00000403184 2217 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 PBX1-209ENST00000485769 834 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 INO80E-214ENST00000620599 515 ntTSL 2 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC31.86■■■□□ 2.69
CCDC141Q6ZP82 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
CCDC141Q6ZP82 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 ESRRAP1-201ENST00000400596 1257 ntBASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 AC093323.1-202ENST00000635031 2045 ntBASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC31.84■■■□□ 2.69
CCDC141Q6ZP82 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC31.83■■■□□ 2.69
CCDC141Q6ZP82 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC31.82■■■□□ 2.69
CCDC141Q6ZP82 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 SERPINH1P1-201ENST00000419794 1249 ntBASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
CCDC141Q6ZP82 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 AC091799.1-201ENST00000422823 811 ntBASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 UNC93B5-201ENST00000530315 699 ntBASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
CCDC141Q6ZP82 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC31.8■■■□□ 2.68
CCDC141Q6ZP82 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.8■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms