Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RAB11FIP1Q6WKZ4 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 AC083906.2-201ENST00000511578 360 ntBASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC21.27■■□□□ 1
RAB11FIP1Q6WKZ4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RAB11FIP1Q6WKZ4 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC092053.2-201ENST00000640557 1818 ntBASIC21.27■□□□□ 0.99
RAB11FIP1Q6WKZ4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RAB11FIP1Q6WKZ4 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 AL121832.2-201ENST00000610979 668 ntBASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC008175.2-201ENST00000612840 297 ntBASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
RAB11FIP1Q6WKZ4 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 CNN2P6-201ENST00000439038 900 ntBASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
RAB11FIP1Q6WKZ4 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 SLC7A5P1-201ENST00000568957 537 ntBASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC120498.10-201ENST00000621827 505 ntBASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RAB11FIP1Q6WKZ4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC127496.7-201ENST00000625110 1798 ntBASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 TERF1P5-201ENST00000477545 1207 ntBASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC003102.1-202ENST00000563394 1796 ntBASIC21.23■□□□□ 0.99
RAB11FIP1Q6WKZ4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
RAB11FIP1Q6WKZ4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RAB11FIP1Q6WKZ4 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.99
RAB11FIP1Q6WKZ4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.2■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms