Protein–RNA interactions for Protein: Q6W349

LINC00575, Putative uncharacterized protein encoded by LINC00575, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00575Q6W349 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
LINC00575Q6W349 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00575Q6W349 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.39□□□□□ -0.27
LINC00575Q6W349 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00575Q6W349 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00575Q6W349 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
LINC00575Q6W349 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 AFG3L1P-217ENST00000557444 2447 ntBASIC13.38□□□□□ -0.27
LINC00575Q6W349 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
LINC00575Q6W349 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 HYI-213ENST00000583037 1322 ntTSL 5 BASIC13.38□□□□□ -0.27
LINC00575Q6W349 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 AC079089.2-201ENST00000531211 1277 ntBASIC13.37□□□□□ -0.27
LINC00575Q6W349 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC13.37□□□□□ -0.27
LINC00575Q6W349 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC13.37□□□□□ -0.27
LINC00575Q6W349 AC006128.1-201ENST00000624704 1661 ntBASIC13.37□□□□□ -0.27
LINC00575Q6W349 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00575Q6W349 AC005703.6-201ENST00000623265 1329 ntBASIC13.37□□□□□ -0.27
LINC00575Q6W349 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 AC139795.1-202ENST00000500444 432 ntBASIC13.36□□□□□ -0.27
LINC00575Q6W349 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 RNF126P1-201ENST00000567452 1320 ntBASIC13.36□□□□□ -0.27
LINC00575Q6W349 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00575Q6W349 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00575Q6W349 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00575Q6W349 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms