Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC026310.3-201ENST00000625186 2373 ntBASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.97■□□□□ 0.63
NHLRC1Q6VVB1 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
NHLRC1Q6VVB1 AC073130.3-201ENST00000624389 2278 ntBASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 AC104564.3-201ENST00000582367 638 ntBASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
NHLRC1Q6VVB1 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 ZNRF2P3-201ENST00000424200 374 ntBASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
NHLRC1Q6VVB1 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 AC027612.3-201ENST00000413684 1047 ntBASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 MIR6084-201ENST00000622012 110 ntBASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
NHLRC1Q6VVB1 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 Z98882.1-201ENST00000622160 2253 ntBASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
NHLRC1Q6VVB1 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms