Protein–RNA interactions for Protein: Q6P3S1

DENND1B, DENN domain-containing protein 1B, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND1BQ6P3S1 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.42■■□□□ 1.18
DENND1BQ6P3S1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 AC097381.1-201ENST00000429019 1296 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L2-201ENST00000561772 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 EEF1DP3-203ENST00000566025 782 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L6-201ENST00000626483 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L1-201ENST00000627662 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L8-201ENST00000629013 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L3-201ENST00000630187 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L7-201ENST00000630678 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 DUX4L5-201ENST00000630834 1275 ntBASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
DENND1BQ6P3S1 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 CLDN5-201ENST00000403084 2357 ntBASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 AC026271.2-201ENST00000428091 497 ntBASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 MIR6821-201ENST00000617625 74 ntBASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 KRT87P-202ENST00000534226 1464 ntBASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
DENND1BQ6P3S1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
DENND1BQ6P3S1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
DENND1BQ6P3S1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
DENND1BQ6P3S1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
DENND1BQ6P3S1 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 KRT18P61-201ENST00000585825 1298 ntBASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.38■■□□□ 1.17
DENND1BQ6P3S1 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 RARRES2P6-201ENST00000567333 442 ntBASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 AC053503.5-201ENST00000601508 636 ntBASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
DENND1BQ6P3S1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 AC004854.2-201ENST00000608450 1441 ntBASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
DENND1BQ6P3S1 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms