Protein–RNA interactions for Protein: Q6NWY9

PRPF40B, Pre-mRNA-processing factor 40 homolog B, humanhuman

Known RBP Predictions only

Length 871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40BQ6NWY9 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.56■■□□□ 1.84
PRPF40BQ6NWY9 AP004607.7-201ENST00000527152 1677 ntBASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 DUSP5P2-201ENST00000426873 1033 ntBASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 AC016405.3-201ENST00000607710 860 ntBASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 AC083880.1-201ENST00000608266 535 ntBASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PRPF40BQ6NWY9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 AC079089.2-201ENST00000531211 1277 ntBASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC26.54■■□□□ 1.84
PRPF40BQ6NWY9 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
PRPF40BQ6NWY9 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC26.52■■□□□ 1.84
PRPF40BQ6NWY9 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 GCSHP5-201ENST00000443090 522 ntBASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 EEF1DP3-203ENST00000566025 782 ntBASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
PRPF40BQ6NWY9 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 AL512625.2-201ENST00000417533 625 ntBASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 BX276092.2-201ENST00000417668 665 ntBASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 ADM-205ENST00000528544 586 ntTSL 2 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
PRPF40BQ6NWY9 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 ESRRAP1-201ENST00000400596 1257 ntBASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 AC069236.1-201ENST00000604339 616 ntBASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 AC008694.1-202ENST00000636953 945 ntBASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 MYC-209ENST00000641252 345 ntBASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
PRPF40BQ6NWY9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC26.48■■□□□ 1.83
PRPF40BQ6NWY9 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRPF40BQ6NWY9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRPF40BQ6NWY9 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PRPF40BQ6NWY9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.48■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms