Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 NTF6G-201ENST00000591094 616 ntBASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 BID-212ENST00000614949 1988 ntTSL 5 BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 KRT18P5-201ENST00000436075 1291 ntBASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
PPP4R3AQ6IN85 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 FBXW4P1-201ENST00000426721 2239 ntBASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 AL162430.1-201ENST00000480705 870 ntBASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
PPP4R3AQ6IN85 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 AC244015.2-201ENST00000616358 1861 ntBASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PPP4R3AQ6IN85 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 AC138907.5-202ENST00000569484 235 ntBASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
PPP4R3AQ6IN85 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 AC104187.1-201ENST00000607510 612 ntBASIC24■■□□□ 1.43
PPP4R3AQ6IN85 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
PPP4R3AQ6IN85 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms