Protein–RNA interactions for Protein: Q6GYQ0

RALGAPA1, Ral GTPase-activating protein subunit alpha-1, humanhuman

Predictions only

Length 2,036 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RALGAPA1Q6GYQ0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
RALGAPA1Q6GYQ0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
RALGAPA1Q6GYQ0 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
RALGAPA1Q6GYQ0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.87■□□□□ 0.93
RALGAPA1Q6GYQ0 PNMA6B-201ENST00000538162 1200 ntBASIC20.87■□□□□ 0.93
RALGAPA1Q6GYQ0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.86■□□□□ 0.93
RALGAPA1Q6GYQ0 KRT17P1-201ENST00000399211 1546 ntBASIC20.86■□□□□ 0.93
RALGAPA1Q6GYQ0 SNORA78-201ENST00000459373 127 ntBASIC20.86■□□□□ 0.93
RALGAPA1Q6GYQ0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.86■□□□□ 0.93
RALGAPA1Q6GYQ0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RALGAPA1Q6GYQ0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 REXO1L12P-201ENST00000622156 912 ntBASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 FAM210CP-201ENST00000445714 574 ntBASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 AL355075.4-201ENST00000554988 638 ntBASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 AC053503.5-201ENST00000601508 636 ntBASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RALGAPA1Q6GYQ0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 AL139125.2-201ENST00000623134 1869 ntBASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RALGAPA1Q6GYQ0 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RALGAPA1Q6GYQ0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 AL591742.1-201ENST00000604433 565 ntBASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 LINC00526-201ENST00000581067 1875 ntBASIC20.83■□□□□ 0.92
RALGAPA1Q6GYQ0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 AC004812.2-201ENST00000611079 2094 ntBASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 KRT18P21-201ENST00000515767 1272 ntBASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 BX088651.1-201ENST00000540551 451 ntBASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 LSM12P1-201ENST00000411836 588 ntBASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
RALGAPA1Q6GYQ0 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.81■□□□□ 0.92
RALGAPA1Q6GYQ0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms