Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 CD44-222ENST00000526025 1052 ntTSL 2 BASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 PNMA6B-201ENST00000538162 1200 ntBASIC35.09■■■■□ 3.21
SNAPC4Q5SXM2 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 OR7E47P-201ENST00000546390 1422 ntBASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 SPIB-206ENST00000596074 847 ntTSL 2 BASIC35.08■■■■□ 3.21
SNAPC4Q5SXM2 LINC00526-201ENST00000581067 1875 ntBASIC35.07■■■■□ 3.21
SNAPC4Q5SXM2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 POU5F1P4-201ENST00000413175 1085 ntBASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC35.07■■■■□ 3.2
SNAPC4Q5SXM2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC35.06■■■■□ 3.2
SNAPC4Q5SXM2 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC35.05■■■■□ 3.2
SNAPC4Q5SXM2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC35.05■■■■□ 3.2
SNAPC4Q5SXM2 RN7SL471P-201ENST00000580476 299 ntBASIC35.05■■■■□ 3.2
SNAPC4Q5SXM2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
SNAPC4Q5SXM2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC35.05■■■■□ 3.2
SNAPC4Q5SXM2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC35.04■■■■□ 3.2
SNAPC4Q5SXM2 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
SNAPC4Q5SXM2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 AC012618.2-201ENST00000428058 849 ntBASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC35.02■■■■□ 3.2
SNAPC4Q5SXM2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC35.01■■■■□ 3.2
SNAPC4Q5SXM2 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
SNAPC4Q5SXM2 REXO2-216ENST00000544196 452 ntTSL 3 BASIC35.01■■■■□ 3.19
SNAPC4Q5SXM2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC35.01■■■■□ 3.19
SNAPC4Q5SXM2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC35.01■■■■□ 3.19
SNAPC4Q5SXM2 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC35■■■■□ 3.19
SNAPC4Q5SXM2 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 SLC29A4P2-201ENST00000504749 1089 ntBASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 KLF2-202ENST00000592003 564 ntTSL 3 BASIC34.99■■■■□ 3.19
SNAPC4Q5SXM2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC34.98■■■■□ 3.19
SNAPC4Q5SXM2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC34.98■■■■□ 3.19
SNAPC4Q5SXM2 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC34.98■■■■□ 3.19
SNAPC4Q5SXM2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC34.98■■■■□ 3.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms