Protein–RNA interactions for Protein: Q5PRF9

SAMD4B, Protein Smaug homolog 2, humanhuman

Known RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4BQ5PRF9 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SAMD4BQ5PRF9 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 MTDHP2-201ENST00000601468 714 ntBASIC20.08■□□□□ 0.81
SAMD4BQ5PRF9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
SAMD4BQ5PRF9 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 AC241377.3-202ENST00000626088 1088 ntBASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 AC241585.3-202ENST00000628937 1088 ntBASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 AC245100.8-202ENST00000629247 1058 ntBASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SAMD4BQ5PRF9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 AL034346.1-201ENST00000568244 1277 ntBASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 Z92544.1-202ENST00000571933 1220 ntBASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 AC073314.1-201ENST00000568729 2216 ntBASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
SAMD4BQ5PRF9 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 AC087239.1-201ENST00000622671 572 ntBASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 AC003102.1-202ENST00000563394 1796 ntBASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SAMD4BQ5PRF9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.04■□□□□ 0.8
SAMD4BQ5PRF9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms