Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM1Q5H8C1 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
FREM1Q5H8C1 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.67■□□□□ 0.58
FREM1Q5H8C1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.67■□□□□ 0.58
FREM1Q5H8C1 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 NAA20-201ENST00000310450 920 ntTSL 2 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
FREM1Q5H8C1 MIR663A-201ENST00000385250 93 ntBASIC18.65■□□□□ 0.58
FREM1Q5H8C1 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 AP001160.3-201ENST00000601484 763 ntBASIC18.65■□□□□ 0.58
FREM1Q5H8C1 LINC00565-201ENST00000562710 2331 ntBASIC18.65■□□□□ 0.58
FREM1Q5H8C1 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.65■□□□□ 0.58
FREM1Q5H8C1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 BID-214ENST00000617586 542 ntTSL 5 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.65■□□□□ 0.58
FREM1Q5H8C1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FREM1Q5H8C1 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
FREM1Q5H8C1 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 AC073111.5-205ENST00000641717 521 ntBASIC18.64■□□□□ 0.57
FREM1Q5H8C1 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 ECEL1P1-201ENST00000373592 1742 ntBASIC18.64■□□□□ 0.57
FREM1Q5H8C1 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.64■□□□□ 0.57
FREM1Q5H8C1 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
FREM1Q5H8C1 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
FREM1Q5H8C1 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.61■□□□□ 0.57
FREM1Q5H8C1 KRT16P2-201ENST00000414673 1423 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms