Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 MED25-214ENST00000622402 642 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
LINC01554Q52M75 ADK-206ENST00000541550 2222 ntTSL 2 BASIC10.6□□□□□ -0.71
LINC01554Q52M75 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 AL391005.1-201ENST00000623953 2435 ntBASIC10.59□□□□□ -0.71
LINC01554Q52M75 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC10.59□□□□□ -0.71
LINC01554Q52M75 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
LINC01554Q52M75 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 LINC01521-201ENST00000504184 1943 ntBASIC10.58□□□□□ -0.72
LINC01554Q52M75 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC10.58□□□□□ -0.72
LINC01554Q52M75 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
LINC01554Q52M75 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 METRNL-202ENST00000570778 967 ntTSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 CR559946.2-201ENST00000623684 991 ntBASIC10.57□□□□□ -0.72
LINC01554Q52M75 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
LINC01554Q52M75 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC10.57□□□□□ -0.72
LINC01554Q52M75 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms