Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
TRIM60Q495X7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TRIM60Q495X7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.41■■□□□ 1.34
TRIM60Q495X7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC23.41■■□□□ 1.34
TRIM60Q495X7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC23.41■■□□□ 1.34
TRIM60Q495X7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
TRIM60Q495X7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
TRIM60Q495X7 KRT16P2-201ENST00000414673 1423 ntBASIC23.41■■□□□ 1.34
TRIM60Q495X7 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM60Q495X7 MIR718-201ENST00000390190 70 ntBASIC23.4■■□□□ 1.34
TRIM60Q495X7 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM60Q495X7 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TRIM60Q495X7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC23.4■■□□□ 1.34
TRIM60Q495X7 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM60Q495X7 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
TRIM60Q495X7 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TRIM60Q495X7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM60Q495X7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC23.39■■□□□ 1.33
TRIM60Q495X7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC23.39■■□□□ 1.33
TRIM60Q495X7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.39■■□□□ 1.33
TRIM60Q495X7 MIR4497-201ENST00000583208 89 ntBASIC23.39■■□□□ 1.33
TRIM60Q495X7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
TRIM60Q495X7 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC23.39■■□□□ 1.33
TRIM60Q495X7 AC073912.3-201ENST00000624414 853 ntBASIC23.39■■□□□ 1.33
TRIM60Q495X7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC23.39■■□□□ 1.33
TRIM60Q495X7 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM60Q495X7 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM60Q495X7 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
TRIM60Q495X7 KRT17P1-201ENST00000399211 1546 ntBASIC23.38■■□□□ 1.33
TRIM60Q495X7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 ANOS2P-203ENST00000472227 1816 ntBASIC23.38■■□□□ 1.33
TRIM60Q495X7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 MIR1224-201ENST00000408193 85 ntBASIC23.38■■□□□ 1.33
TRIM60Q495X7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TRIM60Q495X7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.38■■□□□ 1.33
TRIM60Q495X7 AC243732.1-201ENST00000612648 864 ntBASIC23.38■■□□□ 1.33
TRIM60Q495X7 FAM197Y4-202ENST00000622692 608 ntBASIC23.38■■□□□ 1.33
TRIM60Q495X7 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
TRIM60Q495X7 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC23.37■■□□□ 1.33
TRIM60Q495X7 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM60Q495X7 AL355472.2-201ENST00000422958 438 ntBASIC23.37■■□□□ 1.33
TRIM60Q495X7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM60Q495X7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM60Q495X7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
TRIM60Q495X7 RPPH1-201ENST00000516869 333 ntBASIC23.37■■□□□ 1.33
TRIM60Q495X7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC23.37■■□□□ 1.33
TRIM60Q495X7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TRIM60Q495X7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM60Q495X7 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 GXYLT1P3-201ENST00000453058 1193 ntBASIC23.36■■□□□ 1.33
TRIM60Q495X7 C1QBPP2-201ENST00000528754 825 ntBASIC23.36■■□□□ 1.33
TRIM60Q495X7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC23.36■■□□□ 1.33
TRIM60Q495X7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC23.36■■□□□ 1.33
TRIM60Q495X7 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.36■■□□□ 1.33
TRIM60Q495X7 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
TRIM60Q495X7 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TRIM60Q495X7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC23.35■■□□□ 1.33
TRIM60Q495X7 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.35■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms