Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC24.34■■□□□ 1.49
USH1GQ495M9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
USH1GQ495M9 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.34■■□□□ 1.49
USH1GQ495M9 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC24.34■■□□□ 1.49
USH1GQ495M9 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.34■■□□□ 1.49
USH1GQ495M9 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC24.34■■□□□ 1.49
USH1GQ495M9 AC008175.2-201ENST00000612840 297 ntBASIC24.34■■□□□ 1.49
USH1GQ495M9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC24.34■■□□□ 1.49
USH1GQ495M9 AC231657.2-201ENST00000624556 255 ntBASIC24.34■■□□□ 1.49
USH1GQ495M9 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
USH1GQ495M9 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
USH1GQ495M9 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC24.33■■□□□ 1.49
USH1GQ495M9 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
USH1GQ495M9 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC24.33■■□□□ 1.49
USH1GQ495M9 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC24.33■■□□□ 1.49
USH1GQ495M9 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
USH1GQ495M9 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.33■■□□□ 1.49
USH1GQ495M9 AC007322.1-201ENST00000426983 750 ntBASIC24.33■■□□□ 1.49
USH1GQ495M9 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC24.33■■□□□ 1.49
USH1GQ495M9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC24.33■■□□□ 1.49
USH1GQ495M9 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC24.33■■□□□ 1.49
USH1GQ495M9 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
USH1GQ495M9 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC24.33■■□□□ 1.48
USH1GQ495M9 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
USH1GQ495M9 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.33■■□□□ 1.48
USH1GQ495M9 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.32■■□□□ 1.48
USH1GQ495M9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC24.32■■□□□ 1.48
USH1GQ495M9 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.32■■□□□ 1.48
USH1GQ495M9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.32■■□□□ 1.48
USH1GQ495M9 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC24.32■■□□□ 1.48
USH1GQ495M9 AL050303.2-201ENST00000619798 666 ntBASIC24.32■■□□□ 1.48
USH1GQ495M9 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
USH1GQ495M9 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 AC061975.6-201ENST00000579045 1553 ntBASIC24.32■■□□□ 1.48
USH1GQ495M9 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
USH1GQ495M9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC24.32■■□□□ 1.48
USH1GQ495M9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.32■■□□□ 1.48
USH1GQ495M9 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.31■■□□□ 1.48
USH1GQ495M9 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.31■■□□□ 1.48
USH1GQ495M9 CNN2P6-201ENST00000439038 900 ntBASIC24.31■■□□□ 1.48
USH1GQ495M9 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC24.31■■□□□ 1.48
USH1GQ495M9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.31■■□□□ 1.48
USH1GQ495M9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
USH1GQ495M9 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC24.31■■□□□ 1.48
USH1GQ495M9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
USH1GQ495M9 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
USH1GQ495M9 AC133561.1-201ENST00000568600 2415 ntBASIC24.3■■□□□ 1.48
USH1GQ495M9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
USH1GQ495M9 AC005181.1-201ENST00000604782 1256 ntBASIC24.3■■□□□ 1.48
USH1GQ495M9 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
USH1GQ495M9 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC24.3■■□□□ 1.48
USH1GQ495M9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.3■■□□□ 1.48
USH1GQ495M9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.29■■□□□ 1.48
USH1GQ495M9 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USH1GQ495M9 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
USH1GQ495M9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC24.29■■□□□ 1.48
USH1GQ495M9 AC104771.1-201ENST00000603335 964 ntBASIC24.29■■□□□ 1.48
USH1GQ495M9 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.29■■□□□ 1.48
USH1GQ495M9 AC120498.10-201ENST00000621827 505 ntBASIC24.29■■□□□ 1.48
USH1GQ495M9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
USH1GQ495M9 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
USH1GQ495M9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USH1GQ495M9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USH1GQ495M9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
USH1GQ495M9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
USH1GQ495M9 POU5F1P4-201ENST00000413175 1085 ntBASIC24.28■■□□□ 1.48
USH1GQ495M9 NCF1B-203ENST00000435988 1254 ntBASIC24.28■■□□□ 1.48
USH1GQ495M9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.28■■□□□ 1.48
USH1GQ495M9 SLC7A5P1-201ENST00000568957 537 ntBASIC24.28■■□□□ 1.48
USH1GQ495M9 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.28■■□□□ 1.48
USH1GQ495M9 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
USH1GQ495M9 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC24.28■■□□□ 1.48
USH1GQ495M9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
USH1GQ495M9 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
USH1GQ495M9 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC24.28■■□□□ 1.48
USH1GQ495M9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC24.28■■□□□ 1.48
USH1GQ495M9 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USH1GQ495M9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms