Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PDS5AQ29RF7 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
PDS5AQ29RF7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
PDS5AQ29RF7 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 AL355802.2-201ENST00000402069 882 ntBASIC25.52■■□□□ 1.68
PDS5AQ29RF7 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
PDS5AQ29RF7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.51■■□□□ 1.68
PDS5AQ29RF7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 AF201337.1-201ENST00000520239 748 ntBASIC25.51■■□□□ 1.67
PDS5AQ29RF7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 AC010542.4-201ENST00000563151 1910 ntBASIC25.51■■□□□ 1.67
PDS5AQ29RF7 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
PDS5AQ29RF7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 GALC-202ENST00000393568 2054 ntTSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 CD44-222ENST00000526025 1052 ntTSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC25.5■■□□□ 1.67
PDS5AQ29RF7 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 OR10C1-204ENST00000622521 1039 ntBASIC25.49■■□□□ 1.67
PDS5AQ29RF7 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PDS5AQ29RF7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
PDS5AQ29RF7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 MARS-234ENST00000630571 216 ntTSL 5 BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 MARS-235ENST00000630803 183 ntTSL 3 BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
PDS5AQ29RF7 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms