Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 RKM4YDR257C 1485 nt2.29□□□□□ -2.04
RFU1Q08003 CGR1YGL029W 363 nt2.29□□□□□ -2.04
RFU1Q08003 RPL14BYHL001W 417 nt2.29□□□□□ -2.04
RFU1Q08003 TCD1YHR003C 1290 nt2.29□□□□□ -2.04
RFU1Q08003 KTI11YBL071W-A 249 nt2.29□□□□□ -2.04
RFU1Q08003 SYC1YOR179C 567 nt2.29□□□□□ -2.04
RFU1Q08003 SKP2YNL311C 2292 nt2.29□□□□□ -2.04
RFU1Q08003 VIP1YLR410W 3441 nt2.28□□□□□ -2.04
RFU1Q08003 NAB3YPL190C 2409 nt2.28□□□□□ -2.04
RFU1Q08003 NUM1YDR150W 8247 nt2.28□□□□□ -2.04
RFU1Q08003 GRX3YDR098C 858 nt2.28□□□□□ -2.04
RFU1Q08003 PHO92YDR374C 921 nt2.28□□□□□ -2.04
RFU1Q08003 THO1YER063W 657 nt2.28□□□□□ -2.04
RFU1Q08003 YIL054WYIL054W 318 nt2.28□□□□□ -2.04
RFU1Q08003 YUH1YJR099W 711 nt2.28□□□□□ -2.04
RFU1Q08003 YNL203CYNL203C 612 nt2.28□□□□□ -2.04
RFU1Q08003 RRD2YPL152W 1077 nt2.28□□□□□ -2.04
RFU1Q08003 FRE8YLR047C 2061 nt2.28□□□□□ -2.04
RFU1Q08003 YDR210W-BYDR210W-B 5313 nt2.28□□□□□ -2.04
RFU1Q08003 YLR410W-BYLR410W-B 5313 nt2.28□□□□□ -2.04
RFU1Q08003 DNA2YHR164C 4569 nt2.27□□□□□ -2.05
RFU1Q08003 JIP5YPR169W 1479 nt2.27□□□□□ -2.05
RFU1Q08003 PUS9YDL036C 1389 nt2.27□□□□□ -2.05
RFU1Q08003 SRO9YCL037C 1305 nt2.27□□□□□ -2.05
RFU1Q08003 VPS64YDR200C 1815 nt2.27□□□□□ -2.05
RFU1Q08003 YDR340WYDR340W 303 nt2.27□□□□□ -2.05
RFU1Q08003 AIM11YER093C-A 414 nt2.27□□□□□ -2.05
RFU1Q08003 AML1YGR001C 747 nt2.27□□□□□ -2.05
RFU1Q08003 YHR137C-AYHR137C-A 651 nt2.27□□□□□ -2.05
RFU1Q08003 YKL177WYKL177W 339 nt2.27□□□□□ -2.05
RFU1Q08003 SDO1YLR022C 753 nt2.27□□□□□ -2.05
RFU1Q08003 USB1YLR132C 873 nt2.27□□□□□ -2.05
RFU1Q08003 YOR331CYOR331C 558 nt2.27□□□□□ -2.05
RFU1Q08003 YBR096WYBR096W 693 nt2.27□□□□□ -2.05
RFU1Q08003 SIN3YOL004W 4611 nt2.27□□□□□ -2.05
RFU1Q08003 SUL1YBR294W 2580 nt2.26□□□□□ -2.05
RFU1Q08003 ITT1YML068W 1395 nt2.26□□□□□ -2.05
RFU1Q08003 CLD1YGR110W 1338 nt2.26□□□□□ -2.05
RFU1Q08003 YCR007CYCR007C 720 nt2.26□□□□□ -2.05
RFU1Q08003 MRP10YDL045W-A 288 nt2.26□□□□□ -2.05
RFU1Q08003 ARC15YIL062C 465 nt2.26□□□□□ -2.05
RFU1Q08003 YMR187CYMR187C 1296 nt2.26□□□□□ -2.05
RFU1Q08003 YBL081WYBL081W 1107 nt2.26□□□□□ -2.05
RFU1Q08003 YPK1YKL126W 2043 nt2.25□□□□□ -2.05
RFU1Q08003 VAC14YLR386W 2643 nt2.25□□□□□ -2.05
RFU1Q08003 DUG2YBR281C 2637 nt2.25□□□□□ -2.05
RFU1Q08003 FKS3YMR306W 5358 nt2.25□□□□□ -2.05
RFU1Q08003 ABD1YBR236C 1311 nt2.25□□□□□ -2.05
RFU1Q08003 YIP5YGL161C 933 nt2.25□□□□□ -2.05
RFU1Q08003 YGR026WYGR026W 837 nt2.25□□□□□ -2.05
RFU1Q08003 GPI14YJR013W 1212 nt2.25□□□□□ -2.05
RFU1Q08003 ERV41YML067C 1059 nt2.25□□□□□ -2.05
RFU1Q08003 MSN1YOL116W 1149 nt2.25□□□□□ -2.05
RFU1Q08003 YOR082CYOR082C 342 nt2.25□□□□□ -2.05
RFU1Q08003 21S_rRNA21S_rRNA 3296 nt2.25□□□□□ -2.05
RFU1Q08003 MUM3YOR298W 1440 nt2.25□□□□□ -2.05
RFU1Q08003 KHA1YJL094C 2622 nt2.24□□□□□ -2.05
RFU1Q08003 RPL25YOL127W 429 nt2.24□□□□□ -2.05
RFU1Q08003 SRO77YBL106C 3033 nt2.24□□□□□ -2.05
RFU1Q08003 PTP3YER075C 2787 nt2.24□□□□□ -2.05
RFU1Q08003 PDR1YGL013C 3207 nt2.23□□□□□ -2.05
RFU1Q08003 YNL011CYNL011C 1335 nt2.23□□□□□ -2.05
RFU1Q08003 BNI4YNL233W 2679 nt2.23□□□□□ -2.05
RFU1Q08003 YEL009C-AYEL009C-A 408 nt2.23□□□□□ -2.05
RFU1Q08003 YGR273CYGR273C 525 nt2.23□□□□□ -2.05
RFU1Q08003 DOG1YHR044C 741 nt2.23□□□□□ -2.05
RFU1Q08003 SOL3YHR163W 750 nt2.23□□□□□ -2.05
RFU1Q08003 RNR2YJL026W 1200 nt2.23□□□□□ -2.05
RFU1Q08003 YAL031W-AYAL031W-A 309 nt2.23□□□□□ -2.05
RFU1Q08003 YNL043CYNL043C 321 nt2.23□□□□□ -2.05
RFU1Q08003 HSP10YOR020C 321 nt2.23□□□□□ -2.05
RFU1Q08003 snR11snR11 258 nt2.23□□□□□ -2.05
RFU1Q08003 PNT1YOR266W 1272 nt2.23□□□□□ -2.05
RFU1Q08003 RPS11BYBR048W 471 nt2.23□□□□□ -2.05
RFU1Q08003 YBR085C-AYBR085C-A 258 nt2.23□□□□□ -2.05
RFU1Q08003 AVT2YEL064C 1443 nt2.23□□□□□ -2.05
RFU1Q08003 MLH1YMR167W 2310 nt2.23□□□□□ -2.05
RFU1Q08003 YDR261W-BYDR261W-B 5313 nt2.22□□□□□ -2.05
RFU1Q08003 YFL002W-AYFL002W-A 5313 nt2.22□□□□□ -2.05
RFU1Q08003 YGR161W-BYGR161W-B 5313 nt2.22□□□□□ -2.05
RFU1Q08003 YCL019WYCL019W 5313 nt2.22□□□□□ -2.05
RFU1Q08003 RSE1YML049C 4086 nt2.22□□□□□ -2.05
RFU1Q08003 MST27YGL051W 705 nt2.22□□□□□ -2.05
RFU1Q08003 RPL24BYGR148C 468 nt2.22□□□□□ -2.05
RFU1Q08003 OTU2YHL013C 924 nt2.22□□□□□ -2.05
RFU1Q08003 VMA6YLR447C 1038 nt2.22□□□□□ -2.05
RFU1Q08003 PIN4YBL051C 2007 nt2.22□□□□□ -2.05
RFU1Q08003 UTP15YMR093W 1542 nt2.22□□□□□ -2.05
RFU1Q08003 HBT1YDL223C 3141 nt2.22□□□□□ -2.05
RFU1Q08003 FIR1YER032W 2631 nt2.21□□□□□ -2.05
RFU1Q08003 HAA1YPR008W 2085 nt2.21□□□□□ -2.06
RFU1Q08003 YFH1YDL120W 525 nt2.21□□□□□ -2.06
RFU1Q08003 YER066C-AYER066C-A 501 nt2.21□□□□□ -2.06
RFU1Q08003 YKL066WYKL066W 444 nt2.21□□□□□ -2.06
RFU1Q08003 YKR070WYKR070W 1059 nt2.21□□□□□ -2.06
RFU1Q08003 PRE8YML092C 753 nt2.21□□□□□ -2.06
RFU1Q08003 CBP6YBR120C 489 nt2.21□□□□□ -2.06
RFU1Q08003 SWD3YBR175W 948 nt2.21□□□□□ -2.06
RFU1Q08003 NFI1YOR156C 2181 nt2.2□□□□□ -2.06
RFU1Q08003 RDS2YPL133C 1341 nt2.2□□□□□ -2.06
Retrieved 100 of 7,029 protein–RNA pairs in 14.9 ms