Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 YLL037WYLL037W 381 nt3.47□□□□□ -1.85
VPS38Q05919 YBL028CYBL028C 321 nt3.47□□□□□ -1.85
VPS38Q05919 YOR203WYOR203W 354 nt3.47□□□□□ -1.85
VPS38Q05919 RPA43YOR340C 981 nt3.47□□□□□ -1.85
VPS38Q05919 POL30YBR088C 777 nt3.47□□□□□ -1.85
VPS38Q05919 YNR063WYNR063W 1824 nt3.47□□□□□ -1.85
VPS38Q05919 YGL082WYGL082W 1146 nt3.46□□□□□ -1.86
VPS38Q05919 BTN2YGR142W 1233 nt3.46□□□□□ -1.86
VPS38Q05919 IKI1YHR187W 930 nt3.46□□□□□ -1.86
VPS38Q05919 YIL175WYIL175W 318 nt3.46□□□□□ -1.86
VPS38Q05919 CTK2YJL006C 972 nt3.46□□□□□ -1.86
VPS38Q05919 YJL156W-AYJL156W-A 222 nt3.46□□□□□ -1.86
VPS38Q05919 YJL222W-BYJL222W-B 138 nt3.46□□□□□ -1.86
VPS38Q05919 YAL064W-BYAL064W-B 381 nt3.46□□□□□ -1.86
VPS38Q05919 YNR062CYNR062C 984 nt3.46□□□□□ -1.86
VPS38Q05919 RSF2YJR127C 4143 nt3.45□□□□□ -1.86
VPS38Q05919 HTA1YDR225W 399 nt3.45□□□□□ -1.86
VPS38Q05919 YDR431WYDR431W 312 nt3.45□□□□□ -1.86
VPS38Q05919 COG7YGL005C 840 nt3.45□□□□□ -1.86
VPS38Q05919 YKL065W-AYKL065W-A 222 nt3.45□□□□□ -1.86
VPS38Q05919 PCD1YLR151C 1023 nt3.45□□□□□ -1.86
VPS38Q05919 YMR122W-AYMR122W-A 255 nt3.45□□□□□ -1.86
VPS38Q05919 YBL055CYBL055C 1257 nt3.45□□□□□ -1.86
VPS38Q05919 YNL013CYNL013C 378 nt3.45□□□□□ -1.86
VPS38Q05919 CIN2YPL241C 807 nt3.45□□□□□ -1.86
VPS38Q05919 RFC5YBR087W 1065 nt3.45□□□□□ -1.86
VPS38Q05919 RPN6YDL097C 1305 nt3.44□□□□□ -1.86
VPS38Q05919 ETP1YHL010C 1758 nt3.44□□□□□ -1.86
VPS38Q05919 BYE1YKL005C 1785 nt3.44□□□□□ -1.86
VPS38Q05919 YCR085WYCR085W 354 nt3.44□□□□□ -1.86
VPS38Q05919 GRX2YDR513W 432 nt3.44□□□□□ -1.86
VPS38Q05919 GPX1YKL026C 504 nt3.44□□□□□ -1.86
VPS38Q05919 URA5YML106W 681 nt3.44□□□□□ -1.86
VPS38Q05919 YSP2YDR326C 4317 nt3.44□□□□□ -1.86
VPS38Q05919 KAP95YLR347C 2586 nt3.44□□□□□ -1.86
VPS38Q05919 DUN1YDL101C 1542 nt3.44□□□□□ -1.86
VPS38Q05919 ATC1YDR184C 885 nt3.43□□□□□ -1.86
VPS38Q05919 MFA1YDR461W 111 nt3.43□□□□□ -1.86
VPS38Q05919 NNT1YLR285W 786 nt3.43□□□□□ -1.86
VPS38Q05919 TVP18YMR071C 504 nt3.43□□□□□ -1.86
VPS38Q05919 ARG2YJL071W 1725 nt3.43□□□□□ -1.86
VPS38Q05919 TOP1YOL006C 2310 nt3.43□□□□□ -1.86
VPS38Q05919 YDR261W-AYDR261W-A 1317 nt3.43□□□□□ -1.86
VPS38Q05919 YHR080CYHR080C 4038 nt3.42□□□□□ -1.86
VPS38Q05919 FLO5YHR211W 3228 nt3.42□□□□□ -1.86
VPS38Q05919 PSP1YDR505C 2526 nt3.42□□□□□ -1.86
VPS38Q05919 PEX1YKL197C 3132 nt3.42□□□□□ -1.86
VPS38Q05919 TMA108YIL137C 2841 nt3.42□□□□□ -1.86
VPS38Q05919 PIG2YIL045W 1617 nt3.42□□□□□ -1.86
VPS38Q05919 RPS14AYCR031C 414 nt3.42□□□□□ -1.86
VPS38Q05919 ERP3YDL018C 678 nt3.42□□□□□ -1.86
VPS38Q05919 MGT1YDL200C 567 nt3.42□□□□□ -1.86
VPS38Q05919 YEL075CYEL075C 369 nt3.42□□□□□ -1.86
VPS38Q05919 SEC4YFL005W 648 nt3.42□□□□□ -1.86
VPS38Q05919 YFL012WYFL012W 447 nt3.42□□□□□ -1.86
VPS38Q05919 UPF3YGR072W 1164 nt3.42□□□□□ -1.86
VPS38Q05919 YKT6YKL196C 603 nt3.42□□□□□ -1.86
VPS38Q05919 RNH203YLR154C 333 nt3.42□□□□□ -1.86
VPS38Q05919 IMP4YNL075W 873 nt3.42□□□□□ -1.86
VPS38Q05919 NIP7YPL211W 546 nt3.42□□□□□ -1.86
VPS38Q05919 ATP20YPR020W 348 nt3.42□□□□□ -1.86
VPS38Q05919 CHO2YGR157W 2610 nt3.42□□□□□ -1.86
VPS38Q05919 RPN2YIL075C 2838 nt3.42□□□□□ -1.86
VPS38Q05919 YPS6YIR039C 1614 nt3.41□□□□□ -1.86
VPS38Q05919 CCM1YGR150C 2595 nt3.41□□□□□ -1.86
VPS38Q05919 NOP4YPL043W 2058 nt3.41□□□□□ -1.86
VPS38Q05919 snR68snR68 136 nt3.41□□□□□ -1.86
VPS38Q05919 CLB3YDL155W 1284 nt3.41□□□□□ -1.86
VPS38Q05919 AI3Q0060 1248 nt3.41□□□□□ -1.86
VPS38Q05919 COBQ0105 1158 nt3.41□□□□□ -1.86
VPS38Q05919 MAM1YER106W 909 nt3.41□□□□□ -1.86
VPS38Q05919 RPL1BYGL135W 654 nt3.41□□□□□ -1.86
VPS38Q05919 BRR6YGL247W 594 nt3.41□□□□□ -1.86
VPS38Q05919 GTR2YGR163W 1026 nt3.41□□□□□ -1.86
VPS38Q05919 YLR416CYLR416C 399 nt3.41□□□□□ -1.86
VPS38Q05919 ERG2YMR202W 669 nt3.41□□□□□ -1.86
VPS38Q05919 RPL1AYPL220W 654 nt3.41□□□□□ -1.86
VPS38Q05919 MED8YBR193C 672 nt3.41□□□□□ -1.86
VPS38Q05919 KAR4YCL055W 1008 nt3.41□□□□□ -1.86
VPS38Q05919 POL2YNL262W 6669 nt3.4□□□□□ -1.86
VPS38Q05919 AKR1YDR264C 2295 nt3.4□□□□□ -1.86
VPS38Q05919 snR83snR83 306 nt3.4□□□□□ -1.87
VPS38Q05919 ARF1YDL192W 546 nt3.4□□□□□ -1.87
VPS38Q05919 YJL175WYJL175W 513 nt3.4□□□□□ -1.87
VPS38Q05919 IME1YJR094C 1083 nt3.4□□□□□ -1.87
VPS38Q05919 YPT6YLR262C 648 nt3.4□□□□□ -1.87
VPS38Q05919 HFD1YMR110C 1599 nt3.4□□□□□ -1.87
VPS38Q05919 OCA2YNL056W 594 nt3.4□□□□□ -1.87
VPS38Q05919 AAR2YBL074C 1068 nt3.4□□□□□ -1.87
VPS38Q05919 YNL276CYNL276C 396 nt3.4□□□□□ -1.87
VPS38Q05919 IZH2YOL002C 954 nt3.4□□□□□ -1.87
VPS38Q05919 HHF1YBR009C 312 nt3.4□□□□□ -1.87
VPS38Q05919 MCA1YOR197W 1299 nt3.4□□□□□ -1.87
VPS38Q05919 SEA4YBL104C 3117 nt3.4□□□□□ -1.87
VPS38Q05919 VPS33YLR396C 2076 nt3.4□□□□□ -1.87
VPS38Q05919 APC5YOR249C 2058 nt3.4□□□□□ -1.87
VPS38Q05919 ESA1YOR244W 1338 nt3.4□□□□□ -1.87
VPS38Q05919 HRD1YOL013C 1656 nt3.39□□□□□ -1.87
VPS38Q05919 FLO9YAL063C 3969 nt3.39□□□□□ -1.87
VPS38Q05919 YPD1YDL235C 504 nt3.39□□□□□ -1.87
Retrieved 100 of 7,029 protein–RNA pairs in 32.4 ms