Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC42P60953 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
CDC42P60953 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
CDC42P60953 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC42P60953 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42P60953 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.29■□□□□ 0.68
CDC42P60953 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.29■□□□□ 0.68
CDC42P60953 AC133637.1-201ENST00000624115 1537 ntBASIC19.29■□□□□ 0.68
CDC42P60953 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CDC42P60953 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CDC42P60953 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
CDC42P60953 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.28■□□□□ 0.68
CDC42P60953 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 KRT125P-201ENST00000546827 989 ntBASIC19.28■□□□□ 0.68
CDC42P60953 AC241377.3-202ENST00000626088 1088 ntBASIC19.28■□□□□ 0.68
CDC42P60953 AC241585.3-202ENST00000628937 1088 ntBASIC19.28■□□□□ 0.68
CDC42P60953 AC245100.8-202ENST00000629247 1058 ntBASIC19.28■□□□□ 0.68
CDC42P60953 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
CDC42P60953 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CDC42P60953 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.28■□□□□ 0.68
CDC42P60953 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
CDC42P60953 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CDC42P60953 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.27■□□□□ 0.68
CDC42P60953 AL451085.2-201ENST00000605085 799 ntBASIC19.27■□□□□ 0.68
CDC42P60953 AC087239.1-201ENST00000622671 572 ntBASIC19.27■□□□□ 0.68
CDC42P60953 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.27■□□□□ 0.68
CDC42P60953 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CDC42P60953 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42P60953 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.27■□□□□ 0.67
CDC42P60953 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
CDC42P60953 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42P60953 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42P60953 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CDC42P60953 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42P60953 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CDC42P60953 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42P60953 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42P60953 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
CDC42P60953 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC19.26■□□□□ 0.67
CDC42P60953 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CDC42P60953 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CDC42P60953 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.26■□□□□ 0.67
CDC42P60953 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CDC42P60953 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.25■□□□□ 0.67
CDC42P60953 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.25■□□□□ 0.67
CDC42P60953 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.25■□□□□ 0.67
CDC42P60953 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 AL034346.1-201ENST00000568244 1277 ntBASIC19.25■□□□□ 0.67
CDC42P60953 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CDC42P60953 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms