Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
CLDN8P56748 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 AC024257.2-201ENST00000549699 147 ntBASIC20.11■□□□□ 0.81
CLDN8P56748 AC126544.1-201ENST00000580842 1059 ntBASIC20.11■□□□□ 0.81
CLDN8P56748 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.11■□□□□ 0.81
CLDN8P56748 AL136162.1-201ENST00000607711 1078 ntBASIC20.11■□□□□ 0.81
CLDN8P56748 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.11■□□□□ 0.81
CLDN8P56748 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
CLDN8P56748 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
CLDN8P56748 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.1■□□□□ 0.81
CLDN8P56748 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN8P56748 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN8P56748 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
CLDN8P56748 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
CLDN8P56748 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 IGHV3-19-201ENST00000521488 291 ntBASIC20.1■□□□□ 0.81
CLDN8P56748 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
CLDN8P56748 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
CLDN8P56748 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN8P56748 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN8P56748 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.09■□□□□ 0.81
CLDN8P56748 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.09■□□□□ 0.81
CLDN8P56748 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
CLDN8P56748 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.09■□□□□ 0.81
CLDN8P56748 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN8P56748 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.09■□□□□ 0.81
CLDN8P56748 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLDN8P56748 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
CLDN8P56748 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 AC135279.3-201ENST00000610945 1311 ntBASIC20.08■□□□□ 0.81
CLDN8P56748 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLDN8P56748 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN8P56748 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN8P56748 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLDN8P56748 AC009237.3-201ENST00000393279 1427 ntBASIC20.08■□□□□ 0.8
CLDN8P56748 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
CLDN8P56748 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.08■□□□□ 0.8
CLDN8P56748 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.08■□□□□ 0.8
CLDN8P56748 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN8P56748 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN8P56748 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLDN8P56748 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.07■□□□□ 0.8
CLDN8P56748 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN8P56748 PALM-207ENST00000590161 2137 ntTSL 4 BASIC20.07■□□□□ 0.8
CLDN8P56748 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN8P56748 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN8P56748 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN8P56748 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.07■□□□□ 0.8
CLDN8P56748 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.07■□□□□ 0.8
CLDN8P56748 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN8P56748 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLDN8P56748 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN8P56748 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLDN8P56748 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN8P56748 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CLDN8P56748 AL157384.1-201ENST00000445995 2473 ntBASIC20.06■□□□□ 0.8
CLDN8P56748 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN8P56748 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN8P56748 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLDN8P56748 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.06■□□□□ 0.8
CLDN8P56748 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLDN8P56748 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.06■□□□□ 0.8
CLDN8P56748 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms