Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
PER3P56645 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
PER3P56645 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
PER3P56645 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC19.47■□□□□ 0.71
PER3P56645 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
PER3P56645 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
PER3P56645 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
PER3P56645 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
PER3P56645 FAM201B-201ENST00000458407 597 ntBASIC19.47■□□□□ 0.71
PER3P56645 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.47■□□□□ 0.71
PER3P56645 RNF165-205ENST00000588679 2904 ntBASIC19.47■□□□□ 0.71
PER3P56645 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 ANOS2P-203ENST00000472227 1816 ntBASIC19.46■□□□□ 0.71
PER3P56645 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
PER3P56645 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.46■□□□□ 0.71
PER3P56645 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
PER3P56645 CPT2-209ENST00000636935 803 ntTSL 5 BASIC19.46■□□□□ 0.71
PER3P56645 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
PER3P56645 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.46■□□□□ 0.71
PER3P56645 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.46■□□□□ 0.71
PER3P56645 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.46■□□□□ 0.71
PER3P56645 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
PER3P56645 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.45■□□□□ 0.7
PER3P56645 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PER3P56645 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.45■□□□□ 0.7
PER3P56645 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.45■□□□□ 0.7
PER3P56645 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.45■□□□□ 0.7
PER3P56645 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
PER3P56645 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
PER3P56645 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC19.44■□□□□ 0.7
PER3P56645 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
PER3P56645 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.44■□□□□ 0.7
PER3P56645 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
PER3P56645 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
PER3P56645 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.44■□□□□ 0.7
PER3P56645 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
PER3P56645 AC007322.1-201ENST00000426983 750 ntBASIC19.44■□□□□ 0.7
PER3P56645 AC083906.2-201ENST00000511578 360 ntBASIC19.44■□□□□ 0.7
PER3P56645 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.44■□□□□ 0.7
PER3P56645 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 GUSBP5-202ENST00000510805 1989 ntBASIC19.44■□□□□ 0.7
PER3P56645 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
PER3P56645 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
PER3P56645 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.44■□□□□ 0.7
PER3P56645 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.43■□□□□ 0.7
PER3P56645 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PER3P56645 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.43■□□□□ 0.7
PER3P56645 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
PER3P56645 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.43■□□□□ 0.7
PER3P56645 TSPY6P-201ENST00000448518 926 ntBASIC19.43■□□□□ 0.7
PER3P56645 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.43■□□□□ 0.7
PER3P56645 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.43■□□□□ 0.7
PER3P56645 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.43■□□□□ 0.7
PER3P56645 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
PER3P56645 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.43■□□□□ 0.7
PER3P56645 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
PER3P56645 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PER3P56645 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PER3P56645 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.42■□□□□ 0.7
PER3P56645 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
PER3P56645 MFSD11-216ENST00000590393 1141 ntBASIC19.42■□□□□ 0.7
PER3P56645 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
PER3P56645 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms