Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3BGRP55822 BX323043.1-201ENST00000641006 1765 ntBASIC20.04■□□□□ 0.8
SH3BGRP55822 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3BGRP55822 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.04■□□□□ 0.8
SH3BGRP55822 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SH3BGRP55822 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SH3BGRP55822 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.03■□□□□ 0.8
SH3BGRP55822 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SH3BGRP55822 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC20.03■□□□□ 0.8
SH3BGRP55822 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 H19-210ENST00000439725 1929 ntTSL 2 BASIC20.03■□□□□ 0.8
SH3BGRP55822 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.03■□□□□ 0.8
SH3BGRP55822 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SH3BGRP55822 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SH3BGRP55822 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SH3BGRP55822 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.02■□□□□ 0.8
SH3BGRP55822 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SH3BGRP55822 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.02■□□□□ 0.8
SH3BGRP55822 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.79
SH3BGRP55822 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
SH3BGRP55822 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.02■□□□□ 0.79
SH3BGRP55822 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
SH3BGRP55822 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
SH3BGRP55822 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3BGRP55822 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3BGRP55822 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3BGRP55822 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC20.01■□□□□ 0.79
SH3BGRP55822 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC20.01■□□□□ 0.79
SH3BGRP55822 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SH3BGRP55822 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.01■□□□□ 0.79
SH3BGRP55822 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SH3BGRP55822 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SH3BGRP55822 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC20■□□□□ 0.79
SH3BGRP55822 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SH3BGRP55822 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20■□□□□ 0.79
SH3BGRP55822 AC087289.5-201ENST00000586076 3175 ntBASIC19.99■□□□□ 0.79
SH3BGRP55822 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 EI24-204ENST00000527235 1625 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3BGRP55822 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SH3BGRP55822 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3BGRP55822 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3BGRP55822 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 AL356740.2-201ENST00000601559 647 ntBASIC19.99■□□□□ 0.79
SH3BGRP55822 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.99■□□□□ 0.79
SH3BGRP55822 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.99■□□□□ 0.79
SH3BGRP55822 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SH3BGRP55822 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms