Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.6■□□□□ 0.57
FOXG1P55316 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.6■□□□□ 0.57
FOXG1P55316 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXG1P55316 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXG1P55316 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.6■□□□□ 0.57
FOXG1P55316 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXG1P55316 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
FOXG1P55316 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
FOXG1P55316 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
FOXG1P55316 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 AC016769.1-201ENST00000409132 1010 ntBASIC18.59■□□□□ 0.57
FOXG1P55316 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.59■□□□□ 0.57
FOXG1P55316 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
FOXG1P55316 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXG1P55316 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
FOXG1P55316 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.58■□□□□ 0.56
FOXG1P55316 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXG1P55316 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.58■□□□□ 0.56
FOXG1P55316 SLC7A5P2-201ENST00000553010 536 ntBASIC18.58■□□□□ 0.56
FOXG1P55316 UBE2DNL-204ENST00000602536 740 ntBASIC18.58■□□□□ 0.56
FOXG1P55316 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 LINC00565-201ENST00000562710 2331 ntBASIC18.58■□□□□ 0.56
FOXG1P55316 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
FOXG1P55316 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.57■□□□□ 0.56
FOXG1P55316 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXG1P55316 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.57■□□□□ 0.56
FOXG1P55316 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC18.57■□□□□ 0.56
FOXG1P55316 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.57■□□□□ 0.56
FOXG1P55316 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
FOXG1P55316 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXG1P55316 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
FOXG1P55316 AC061975.6-201ENST00000579045 1553 ntBASIC18.56■□□□□ 0.56
FOXG1P55316 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.56■□□□□ 0.56
FOXG1P55316 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXG1P55316 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.56■□□□□ 0.56
FOXG1P55316 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 AC011767.1-201ENST00000617410 1153 ntBASIC18.56■□□□□ 0.56
FOXG1P55316 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
FOXG1P55316 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXG1P55316 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.56■□□□□ 0.56
FOXG1P55316 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
FOXG1P55316 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
FOXG1P55316 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms