Protein–RNA interactions for Protein: P54821

PRRX1, Paired mesoderm homeobox protein 1, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRRX1P54821 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.36■□□□□ 0.37
PRRX1P54821 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
PRRX1P54821 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC17.36■□□□□ 0.37
PRRX1P54821 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC17.36■□□□□ 0.37
PRRX1P54821 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRRX1P54821 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
PRRX1P54821 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.35■□□□□ 0.37
PRRX1P54821 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRRX1P54821 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PRRX1P54821 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.35■□□□□ 0.37
PRRX1P54821 TPRG1LP1-201ENST00000598702 760 ntBASIC17.35■□□□□ 0.37
PRRX1P54821 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC17.35■□□□□ 0.37
PRRX1P54821 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 AC055733.4-201ENST00000638462 1354 ntBASIC17.35■□□□□ 0.37
PRRX1P54821 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.35■□□□□ 0.37
PRRX1P54821 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.35■□□□□ 0.37
PRRX1P54821 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRRX1P54821 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
PRRX1P54821 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.35■□□□□ 0.37
PRRX1P54821 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
PRRX1P54821 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.34■□□□□ 0.37
PRRX1P54821 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
PRRX1P54821 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC17.34■□□□□ 0.37
PRRX1P54821 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 FBXW4P1-201ENST00000426721 2239 ntBASIC17.34■□□□□ 0.37
PRRX1P54821 YBX1P1-201ENST00000445822 960 ntBASIC17.34■□□□□ 0.37
PRRX1P54821 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.34■□□□□ 0.37
PRRX1P54821 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.34■□□□□ 0.37
PRRX1P54821 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.34■□□□□ 0.37
PRRX1P54821 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.34■□□□□ 0.37
PRRX1P54821 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.34■□□□□ 0.37
PRRX1P54821 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.34■□□□□ 0.37
PRRX1P54821 CPT2-209ENST00000636935 803 ntTSL 5 BASIC17.34■□□□□ 0.37
PRRX1P54821 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRRX1P54821 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.33■□□□□ 0.37
PRRX1P54821 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.33■□□□□ 0.37
PRRX1P54821 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.33■□□□□ 0.37
PRRX1P54821 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC17.33■□□□□ 0.36
PRRX1P54821 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PRRX1P54821 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC17.33■□□□□ 0.36
PRRX1P54821 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRRX1P54821 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PRRX1P54821 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.33■□□□□ 0.36
PRRX1P54821 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.33■□□□□ 0.36
PRRX1P54821 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
PRRX1P54821 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.33■□□□□ 0.36
PRRX1P54821 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRRX1P54821 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRRX1P54821 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRRX1P54821 AC003102.1-202ENST00000563394 1796 ntBASIC17.33■□□□□ 0.36
PRRX1P54821 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PRRX1P54821 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC17.32■□□□□ 0.36
PRRX1P54821 AC010542.4-201ENST00000563151 1910 ntBASIC17.32■□□□□ 0.36
PRRX1P54821 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRRX1P54821 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRRX1P54821 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 AC079140.4-201ENST00000507448 529 ntBASIC17.32■□□□□ 0.36
PRRX1P54821 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.32■□□□□ 0.36
PRRX1P54821 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC17.32■□□□□ 0.36
PRRX1P54821 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC17.32■□□□□ 0.36
PRRX1P54821 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.32■□□□□ 0.36
PRRX1P54821 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRRX1P54821 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
PRRX1P54821 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRRX1P54821 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.31■□□□□ 0.36
PRRX1P54821 AC026471.6-201ENST00000622954 1905 ntBASIC17.31■□□□□ 0.36
PRRX1P54821 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
PRRX1P54821 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms