Protein–RNA interactions for Protein: P54105

CLNS1A, Methylosome subunit pICln, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1AP54105 AC010542.4-201ENST00000563151 1910 ntBASIC20.93■□□□□ 0.94
CLNS1AP54105 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CLNS1AP54105 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.93■□□□□ 0.94
CLNS1AP54105 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CLNS1AP54105 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CLNS1AP54105 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.93■□□□□ 0.94
CLNS1AP54105 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
CLNS1AP54105 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLNS1AP54105 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CLNS1AP54105 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.92■□□□□ 0.94
CLNS1AP54105 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.92■□□□□ 0.94
CLNS1AP54105 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.92■□□□□ 0.94
CLNS1AP54105 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CLNS1AP54105 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.92■□□□□ 0.94
CLNS1AP54105 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CLNS1AP54105 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.91■□□□□ 0.94
CLNS1AP54105 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.91■□□□□ 0.94
CLNS1AP54105 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.91■□□□□ 0.94
CLNS1AP54105 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.91■□□□□ 0.94
CLNS1AP54105 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CLNS1AP54105 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CLNS1AP54105 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
CLNS1AP54105 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
CLNS1AP54105 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CLNS1AP54105 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CLNS1AP54105 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CLNS1AP54105 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLNS1AP54105 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLNS1AP54105 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CLNS1AP54105 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.89■□□□□ 0.94
CLNS1AP54105 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLNS1AP54105 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLNS1AP54105 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
CLNS1AP54105 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
CLNS1AP54105 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.89■□□□□ 0.94
CLNS1AP54105 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CLNS1AP54105 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CLNS1AP54105 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLNS1AP54105 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CLNS1AP54105 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLNS1AP54105 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.89■□□□□ 0.93
CLNS1AP54105 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.89■□□□□ 0.93
CLNS1AP54105 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.89■□□□□ 0.93
CLNS1AP54105 MIR4787-201ENST00000607364 84 ntBASIC20.89■□□□□ 0.93
CLNS1AP54105 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.89■□□□□ 0.93
CLNS1AP54105 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CLNS1AP54105 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CLNS1AP54105 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CLNS1AP54105 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.89■□□□□ 0.93
CLNS1AP54105 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CLNS1AP54105 AC004687.1-201ENST00000579003 1625 ntBASIC20.89■□□□□ 0.93
CLNS1AP54105 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CLNS1AP54105 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.89■□□□□ 0.93
CLNS1AP54105 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.88■□□□□ 0.93
CLNS1AP54105 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.88■□□□□ 0.93
CLNS1AP54105 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CLNS1AP54105 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CLNS1AP54105 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.88■□□□□ 0.93
CLNS1AP54105 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLNS1AP54105 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.87■□□□□ 0.93
CLNS1AP54105 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CLNS1AP54105 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLNS1AP54105 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms