Protein–RNA interactions for Protein: P54000

SUB1, RNA polymerase II transcriptional coactivator SUB1, yeastyeast

Known RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SUB1P54000 AIM7YDR063W 450 nt3.79□□□□□ -1.8
SUB1P54000 ERG20YJL167W 1059 nt3.79□□□□□ -1.8
SUB1P54000 SRL3YKR091W 741 nt3.79□□□□□ -1.8
SUB1P54000 YIP3YNL044W 531 nt3.79□□□□□ -1.8
SUB1P54000 YPL168WYPL168W 1293 nt3.79□□□□□ -1.8
SUB1P54000 NOG1YPL093W 1944 nt3.79□□□□□ -1.8
SUB1P54000 SAD1YFR005C 1347 nt3.78□□□□□ -1.8
SUB1P54000 SEC4YFL005W 648 nt3.78□□□□□ -1.8
SUB1P54000 YGL159WYGL159W 1113 nt3.78□□□□□ -1.8
SUB1P54000 YGR111WYGR111W 1203 nt3.78□□□□□ -1.8
SUB1P54000 YHR022CYHR022C 771 nt3.78□□□□□ -1.8
SUB1P54000 YHR212CYHR212C 336 nt3.78□□□□□ -1.8
SUB1P54000 YJL169WYJL169W 369 nt3.78□□□□□ -1.8
SUB1P54000 YNK1YKL067W 462 nt3.78□□□□□ -1.8
SUB1P54000 MBR1YKL093W 1020 nt3.78□□□□□ -1.8
SUB1P54000 YAR060CYAR060C 336 nt3.78□□□□□ -1.8
SUB1P54000 DIA1YMR316W 1011 nt3.78□□□□□ -1.8
SUB1P54000 AIM4YBR194W 372 nt3.78□□□□□ -1.8
SUB1P54000 DAN4YJR151C 3486 nt3.78□□□□□ -1.8
SUB1P54000 MSH4YFL003C 2637 nt3.77□□□□□ -1.81
SUB1P54000 ITC1YGL133W 3795 nt3.77□□□□□ -1.81
SUB1P54000 ART10YLR392C 1557 nt3.77□□□□□ -1.81
SUB1P54000 AAD3YCR107W 1092 nt3.77□□□□□ -1.81
SUB1P54000 BMH2YDR099W 822 nt3.77□□□□□ -1.81
SUB1P54000 HMO1YDR174W 741 nt3.77□□□□□ -1.81
SUB1P54000 CPR5YDR304C 678 nt3.77□□□□□ -1.81
SUB1P54000 EMI1YDR512C 564 nt3.77□□□□□ -1.81
SUB1P54000 COG7YGL005C 840 nt3.77□□□□□ -1.81
SUB1P54000 LSM12YHR121W 564 nt3.77□□□□□ -1.81
SUB1P54000 DPH1YIL103W 1278 nt3.77□□□□□ -1.81
SUB1P54000 snR35snR35 204 nt3.77□□□□□ -1.81
SUB1P54000 SPO71YDR104C 3738 nt3.77□□□□□ -1.81
SUB1P54000 RCY1YJL204C 2523 nt3.77□□□□□ -1.81
SUB1P54000 KIN2YLR096W 3444 nt3.76□□□□□ -1.81
SUB1P54000 DOA4YDR069C 2781 nt3.76□□□□□ -1.81
SUB1P54000 FLO1YAR050W 4614 nt3.76□□□□□ -1.81
SUB1P54000 KRE28YDR532C 1158 nt3.76□□□□□ -1.81
SUB1P54000 VEL1YGL258W 621 nt3.76□□□□□ -1.81
SUB1P54000 BAT1YHR208W 1182 nt3.76□□□□□ -1.81
SUB1P54000 RAD14YMR201C 1116 nt3.76□□□□□ -1.81
SUB1P54000 YNL296WYNL296W 315 nt3.76□□□□□ -1.81
SUB1P54000 RGR1YLR071C 3249 nt3.76□□□□□ -1.81
SUB1P54000 VAC14YLR386W 2643 nt3.75□□□□□ -1.81
SUB1P54000 YDR170W-AYDR170W-A 1323 nt3.75□□□□□ -1.81
SUB1P54000 KRE2YDR483W 1329 nt3.75□□□□□ -1.81
SUB1P54000 YBL005W-AYBL005W-A 1323 nt3.75□□□□□ -1.81
SUB1P54000 YMR046CYMR046C 1323 nt3.75□□□□□ -1.81
SUB1P54000 YNL284C-AYNL284C-A 1323 nt3.75□□□□□ -1.81
SUB1P54000 PPQ1YPL179W 1650 nt3.75□□□□□ -1.81
SUB1P54000 TAF1YGR274C 3201 nt3.75□□□□□ -1.81
SUB1P54000 SNT1YCR033W 3681 nt3.75□□□□□ -1.81
SUB1P54000 TVP15YDR100W 432 nt3.75□□□□□ -1.81
SUB1P54000 tV(CAC)DtV(CAC)D 73 nt3.75□□□□□ -1.81
SUB1P54000 tV(CAC)HtV(CAC)H 73 nt3.75□□□□□ -1.81
SUB1P54000 CDC8YJR057W 651 nt3.75□□□□□ -1.81
SUB1P54000 YLR347W-AYLR347W-A 141 nt3.75□□□□□ -1.81
SUB1P54000 SOK1YDR006C 2706 nt3.75□□□□□ -1.81
SUB1P54000 GLC3YEL011W 2115 nt3.74□□□□□ -1.81
SUB1P54000 YDL180WYDL180W 1644 nt3.74□□□□□ -1.81
SUB1P54000 ATP22YDR350C 2055 nt3.74□□□□□ -1.81
SUB1P54000 BMS1YPL217C 3552 nt3.74□□□□□ -1.81
SUB1P54000 CPR1YDR155C 489 nt3.74□□□□□ -1.81
SUB1P54000 HLR1YDR528W 1272 nt3.74□□□□□ -1.81
SUB1P54000 YGL039WYGL039W 1047 nt3.74□□□□□ -1.81
SUB1P54000 ANB1YJR047C 474 nt3.74□□□□□ -1.81
SUB1P54000 YAL031W-AYAL031W-A 309 nt3.74□□□□□ -1.81
SUB1P54000 TAF3YPL011C 1062 nt3.74□□□□□ -1.81
SUB1P54000 NOP56YLR197W 1515 nt3.74□□□□□ -1.81
SUB1P54000 ARO80YDR421W 2853 nt3.73□□□□□ -1.81
SUB1P54000 RTT109YLL002W 1311 nt3.73□□□□□ -1.81
SUB1P54000 KAR1YNL188W 1302 nt3.73□□□□□ -1.81
SUB1P54000 PSY2YNL201C 2577 nt3.73□□□□□ -1.81
SUB1P54000 YDR210W-BYDR210W-B 5313 nt3.73□□□□□ -1.81
SUB1P54000 YDR261W-BYDR261W-B 5313 nt3.73□□□□□ -1.81
SUB1P54000 YFL002W-AYFL002W-A 5313 nt3.73□□□□□ -1.81
SUB1P54000 YGR161W-BYGR161W-B 5313 nt3.73□□□□□ -1.81
SUB1P54000 YLR410W-BYLR410W-B 5313 nt3.73□□□□□ -1.81
SUB1P54000 YCL019WYCL019W 5313 nt3.73□□□□□ -1.81
SUB1P54000 YGL204CYGL204C 306 nt3.73□□□□□ -1.81
SUB1P54000 DSE2YHR143W 978 nt3.73□□□□□ -1.81
SUB1P54000 YJL114WYJL114W 681 nt3.73□□□□□ -1.81
SUB1P54000 HYM1YKL189W 1200 nt3.73□□□□□ -1.81
SUB1P54000 MRPL3YMR024W 1173 nt3.73□□□□□ -1.81
SUB1P54000 THI80YOR143C 960 nt3.73□□□□□ -1.81
SUB1P54000 CBP2YHL038C 1893 nt3.73□□□□□ -1.81
SUB1P54000 MDN1YLR106C 14733 nt3.73□□□□□ -1.81
SUB1P54000 RRP5YMR229C 5190 nt3.73□□□□□ -1.81
SUB1P54000 TSC11YER093C 4293 nt3.73□□□□□ -1.81
SUB1P54000 YDR034C-CYDR034C-C 1317 nt3.72□□□□□ -1.81
SUB1P54000 YLR410W-AYLR410W-A 1317 nt3.72□□□□□ -1.81
SUB1P54000 SEN54YPL083C 1404 nt3.72□□□□□ -1.81
SUB1P54000 GUK1YDR454C 564 nt3.72□□□□□ -1.81
SUB1P54000 CUP1-1YHR053C 186 nt3.72□□□□□ -1.81
SUB1P54000 CUP1-2YHR055C 186 nt3.72□□□□□ -1.81
SUB1P54000 MCR1YKL150W 909 nt3.72□□□□□ -1.81
SUB1P54000 URA4YLR420W 1095 nt3.72□□□□□ -1.81
SUB1P54000 SHH3YMR118C 591 nt3.72□□□□□ -1.81
SUB1P54000 RIM11YMR139W 1113 nt3.72□□□□□ -1.81
SUB1P54000 YBL055CYBL055C 1257 nt3.72□□□□□ -1.81
SUB1P54000 RPL20BYOR312C 519 nt3.72□□□□□ -1.81
Retrieved 100 of 7,029 protein–RNA pairs in 24.2 ms