Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 YML096WYML096W 1578 nt2.87□□□□□ -1.95
YNL040WP53960 YIP5YGL161C 933 nt2.87□□□□□ -1.95
YNL040WP53960 EMC2YJR088C 879 nt2.87□□□□□ -1.95
YNL040WP53960 HOT13YKL084W 351 nt2.87□□□□□ -1.95
YNL040WP53960 OST6YML019W 999 nt2.87□□□□□ -1.95
YNL040WP53960 YML037CYML037C 1023 nt2.87□□□□□ -1.95
YNL040WP53960 MRPL27YBR282W 441 nt2.87□□□□□ -1.95
YNL040WP53960 XRN1YGL173C 4587 nt2.86□□□□□ -1.95
YNL040WP53960 YCR045W-AYCR045W-A 351 nt2.86□□□□□ -1.95
YNL040WP53960 YDL242WYDL242W 354 nt2.86□□□□□ -1.95
YNL040WP53960 RPL24BYGR148C 468 nt2.86□□□□□ -1.95
YNL040WP53960 PTI1YGR156W 1278 nt2.86□□□□□ -1.95
YNL040WP53960 SAW1YAL027W 786 nt2.86□□□□□ -1.95
YNL040WP53960 YKR033CYKR033C 426 nt2.86□□□□□ -1.95
YNL040WP53960 UBS1YBR165W 834 nt2.86□□□□□ -1.95
YNL040WP53960 PRP8YHR165C 7242 nt2.86□□□□□ -1.95
YNL040WP53960 ITT1YML068W 1395 nt2.86□□□□□ -1.95
YNL040WP53960 ORC1YML065W 2745 nt2.85□□□□□ -1.95
YNL040WP53960 RAX2YLR084C 3663 nt2.85□□□□□ -1.95
YNL040WP53960 NDC80YIL144W 2076 nt2.85□□□□□ -1.95
YNL040WP53960 RAD5YLR032W 3510 nt2.85□□□□□ -1.95
YNL040WP53960 PEX10YDR265W 1014 nt2.85□□□□□ -1.95
YNL040WP53960 MST27YGL051W 705 nt2.85□□□□□ -1.95
YNL040WP53960 YGR168CYGR168C 1131 nt2.85□□□□□ -1.95
YNL040WP53960 YGR190CYGR190C 366 nt2.85□□□□□ -1.95
YNL040WP53960 YIL156W-AYIL156W-A 402 nt2.85□□□□□ -1.95
YNL040WP53960 SNX4YJL036W 1272 nt2.85□□□□□ -1.95
YNL040WP53960 SSP2YOR242C 1116 nt2.85□□□□□ -1.95
YNL040WP53960 FIG1YBR040W 897 nt2.85□□□□□ -1.95
YNL040WP53960 ATG5YPL149W 885 nt2.85□□□□□ -1.95
YNL040WP53960 ARA1YBR149W 1035 nt2.85□□□□□ -1.95
YNL040WP53960 ESL2YKR096W 3588 nt2.85□□□□□ -1.95
YNL040WP53960 TSC11YER093C 4293 nt2.85□□□□□ -1.95
YNL040WP53960 STE24YJR117W 1362 nt2.85□□□□□ -1.95
YNL040WP53960 MSM1YGR171C 1728 nt2.85□□□□□ -1.95
YNL040WP53960 IOC3YFR013W 2364 nt2.85□□□□□ -1.95
YNL040WP53960 PKP2YGL059W 1476 nt2.84□□□□□ -1.95
YNL040WP53960 TSC13YDL015C 933 nt2.84□□□□□ -1.95
YNL040WP53960 SMT3YDR510W 306 nt2.84□□□□□ -1.95
YNL040WP53960 GRX2YDR513W 432 nt2.84□□□□□ -1.95
YNL040WP53960 GPP2YER062C 753 nt2.84□□□□□ -1.95
YNL040WP53960 YGL006W-AYGL006W-A 111 nt2.84□□□□□ -1.95
YNL040WP53960 PPE1YHR075C 1203 nt2.84□□□□□ -1.95
YNL040WP53960 YIL174WYIL174W 228 nt2.84□□□□□ -1.95
YNL040WP53960 YJL222W-AYJL222W-A 228 nt2.84□□□□□ -1.95
YNL040WP53960 YLR290CYLR290C 834 nt2.84□□□□□ -1.95
YNL040WP53960 JIP3YLR331C 378 nt2.84□□□□□ -1.95
YNL040WP53960 RDN58-1RDN58-1 158 nt2.84□□□□□ -1.95
YNL040WP53960 RDN58-2RDN58-2 158 nt2.84□□□□□ -1.95
YNL040WP53960 GLO1YML004C 981 nt2.84□□□□□ -1.95
YNL040WP53960 IZH4YOL101C 939 nt2.84□□□□□ -1.95
YNL040WP53960 BAG7YOR134W 1230 nt2.84□□□□□ -1.95
YNL040WP53960 MCA1YOR197W 1299 nt2.84□□□□□ -1.95
YNL040WP53960 SAS5YOR213C 747 nt2.84□□□□□ -1.95
YNL040WP53960 RPN8YOR261C 1017 nt2.84□□□□□ -1.95
YNL040WP53960 YPL035CYPL035C 348 nt2.84□□□□□ -1.95
YNL040WP53960 PBP2YBR233W 1242 nt2.84□□□□□ -1.95
YNL040WP53960 SEC7YDR170C 6030 nt2.84□□□□□ -1.95
YNL040WP53960 RDS2YPL133C 1341 nt2.84□□□□□ -1.96
YNL040WP53960 AXL1YPR122W 3627 nt2.83□□□□□ -1.96
YNL040WP53960 YAT2YER024W 2772 nt2.83□□□□□ -1.96
YNL040WP53960 MON1YGL124C 1935 nt2.83□□□□□ -1.96
YNL040WP53960 MOT1YPL082C 5604 nt2.83□□□□□ -1.96
YNL040WP53960 KIN82YCR091W 2163 nt2.83□□□□□ -1.96
YNL040WP53960 YDR124WYDR124W 975 nt2.83□□□□□ -1.96
YNL040WP53960 RPS23AYGR118W 438 nt2.83□□□□□ -1.96
YNL040WP53960 RPL14BYHL001W 417 nt2.83□□□□□ -1.96
YNL040WP53960 YVH1YIR026C 1095 nt2.83□□□□□ -1.96
YNL040WP53960 YJR071WYJR071W 369 nt2.83□□□□□ -1.96
YNL040WP53960 GAB1YLR459W 1185 nt2.83□□□□□ -1.96
YNL040WP53960 PRE8YML092C 753 nt2.83□□□□□ -1.96
YNL040WP53960 YMR141CYMR141C 309 nt2.83□□□□□ -1.96
YNL040WP53960 RPL13BYMR142C 600 nt2.83□□□□□ -1.96
YNL040WP53960 MSN1YOL116W 1149 nt2.83□□□□□ -1.96
YNL040WP53960 SYC1YOR179C 567 nt2.83□□□□□ -1.96
YNL040WP53960 RPS23BYPR132W 438 nt2.83□□□□□ -1.96
YNL040WP53960 NSA1YGL111W 1392 nt2.83□□□□□ -1.96
YNL040WP53960 MYO5YMR109W 3660 nt2.83□□□□□ -1.96
YNL040WP53960 DUN1YDL101C 1542 nt2.83□□□□□ -1.96
YNL040WP53960 SLH1YGR271W 5904 nt2.82□□□□□ -1.96
YNL040WP53960 ECM29YHL030W 5607 nt2.82□□□□□ -1.96
YNL040WP53960 MSH2YOL090W 2895 nt2.82□□□□□ -1.96
YNL040WP53960 RPL1BYGL135W 654 nt2.82□□□□□ -1.96
YNL040WP53960 TAN1YGL232W 870 nt2.82□□□□□ -1.96
YNL040WP53960 YHR022CYHR022C 771 nt2.82□□□□□ -1.96
YNL040WP53960 YIL024CYIL024C 570 nt2.82□□□□□ -1.96
YNL040WP53960 DCG1YIR030C 735 nt2.82□□□□□ -1.96
YNL040WP53960 YKL162CYKL162C 1209 nt2.82□□□□□ -1.96
YNL040WP53960 YNL171CYNL171C 369 nt2.82□□□□□ -1.96
YNL040WP53960 ATG3YNR007C 933 nt2.82□□□□□ -1.96
YNL040WP53960 PRM4YPL156C 855 nt2.82□□□□□ -1.96
YNL040WP53960 ATG29YPL166W 642 nt2.82□□□□□ -1.96
YNL040WP53960 RPL1AYPL220W 654 nt2.82□□□□□ -1.96
YNL040WP53960 YPR053CYPR053C 456 nt2.82□□□□□ -1.96
YNL040WP53960 YBR085C-AYBR085C-A 258 nt2.82□□□□□ -1.96
YNL040WP53960 VBA4YDR119W 2307 nt2.82□□□□□ -1.96
YNL040WP53960 STP2YHR006W 1626 nt2.82□□□□□ -1.96
YNL040WP53960 TFC1YBR123C 1950 nt2.81□□□□□ -1.96
YNL040WP53960 REG1YDR028C 3045 nt2.81□□□□□ -1.96
YNL040WP53960 YGL138CYGL138C 1038 nt2.81□□□□□ -1.96
Retrieved 100 of 7,029 protein–RNA pairs in 17.8 ms